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    NSF AAA-type ATPase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825830, updated on 4-Jul-2019

    Summary

    Gene symbol
    NSF
    Gene description
    AAA-type ATPase family protein
    Primary source
    Araport:AT4G04910
    Locus tag
    AT4G04910
    Gene type
    protein coding
    RNA name
    AAA-type ATPase family protein
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    N-ethylmaleimide sensitive factor; T1J1.4; T1J1_4

    Genomic context

    See NSF in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    21
    Sequence:
    Chromosome: 4; NC_003075.7 (2489364..2495863, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene protodermal factor 2 Neighboring gene ROP-interactive CRIB motif-containing protein 10 Neighboring gene sensitive to freezing 6 Neighboring gene transmembrane protein

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_116729.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    Golgi to plasma membrane protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi vesicle docking IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    SNARE complex disassembly IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Golgi stack IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm ISM
    Inferred from Sequence Model
    more info
     
    cytosol HDA PubMed 
    plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    plasmodesma IDA
    Inferred from Direct Assay
    more info
    PubMed 
    vacuole IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    AAA-type ATPase family protein
    NP_192400.2
    • N-ethylmaleimide sensitive factor (NSF); FUNCTIONS IN: protein binding; LOCATED IN: vacuole; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA-type, conserved site (InterPro:IPR003960), Aspartate decarboxylase-like fold (InterPro:IPR009010), Cell division protein 48, CDC48, domain 2 (InterPro:IPR004201), ATPase, AAA-type, VAT, N-terminal (InterPro:IPR003338); BEST Arabidopsis thaliana protein match is: cell division cycle 48 (TAIR:AT3G09840.1); Has 30539 Blast hits to 27448 proteins in 3106 species: Archae - 1540; Bacteria - 10808; Metazoa - 4854; Fungi - 3637; Plants - 2891; Viruses - 27; Other Eukaryotes - 6782 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2489364..2495863 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116729.4NP_192400.2  AAA-type ATPase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192400.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M0Y8
      UniProtKB/TrEMBL
      A0A178UTB9
      Conserved Domains (6) summary
      cd00009
      Location:527662
      AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
      smart00382
      Location:251396
      AAA; ATPases associated with a variety of cellular activities
      smart01073
      Location:1292
      CDC48_N; Cell division protein 48 (CDC48) N-terminal domain
      pfam00004
      Location:253394
      AAA; ATPase family associated with various cellular activities (AAA)
      pfam02933
      Location:127173
      CDC48_2; Cell division protein 48 (CDC48), domain 2
      cl24009
      Location:170270
      Parvo_NS1; Parvovirus non-structural protein NS1
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