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    MATN2 matrilin 2 [ Bos taurus (cattle) ]

    Gene ID: 781953, updated on 27-Aug-2018

    Summary

    Official Symbol
    MATN2provided by VGNC
    Official Full Name
    matrilin 2provided by VGNC
    Primary source
    VGNC:VGNC:31265
    See related
    Ensembl:ENSBTAG00000017165
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See MATN2 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 14 NC_037341.1 (66186819..66359827, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 14 AC_000171.1 (68478179..68651684, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene glutamate rich 5 Neighboring gene small nucleolar RNA SNORA72 Neighboring gene ribosomal protein L30 Neighboring gene uncharacterized LOC112449541 Neighboring gene U6 spliceosomal RNA Neighboring gene lysosomal protein transmembrane 4 beta

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Clone Names

    • MGC139110

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102528.1NP_001095998.1  matrilin-2 precursor

      See identical proteins and their annotated locations for NP_001095998.1

      Status: PROVISIONAL

      Source sequence(s)
      BC140516
      UniProtKB/TrEMBL
      A5D7D5
      Related
      ENSBTAP00000022815.5, ENSBTAT00000022815.5
      Conserved Domains (4) summary
      cd01475
      Location:56278
      vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
      pfam10393
      Location:913955
      Matrilin_ccoil; Trimeric coiled-coil oligomerization domain of matrilin
      pfam14670
      Location:408443
      FXa_inhibition; Coagulation Factor Xa inhibitory site
      cl00057
      Location:654894
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      66186819..66359827 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005215629.2XP_005215686.1  matrilin-2 isoform X1

      Conserved Domains (4) summary
      cd01475
      Location:56278
      vWA_Matrilin; VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. ...
      pfam10393
      Location:894936
      Matrilin_ccoil; Trimeric coiled-coil oligomerization domain of matrilin
      pfam14670
      Location:408443
      FXa_inhibition; Coagulation Factor Xa inhibitory site
      cl00057
      Location:654875
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
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