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    gclc glutamate-cysteine ligase, catalytic subunit [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 780264, updated on 9-Oct-2019

    Summary

    Symbol
    gclcprovided by Xenbase
    Full Name
    glutamate-cysteine ligase, catalytic subunitprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1002435
    See related
    Ensembl:ENSXETG00000016966
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See gclc in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (114262439..114291081, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668237.1 (32604205..32632847, complement)

    Chromosome 5 - NC_030681.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105947389 Neighboring gene ELOVL fatty acid elongase 5 Neighboring gene transcription elongation factor B polypeptide 3-like Neighboring gene kelch like family member 31 Neighboring gene leucine rich repeat containing 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Clone Names

    • MGC146287

    General protein information

    Preferred Names
    glutamate--cysteine ligase catalytic subunit
    NP_001072803.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079335.1NP_001072803.1  glutamate--cysteine ligase catalytic subunit

      See identical proteins and their annotated locations for NP_001072803.1

      Status: PROVISIONAL

      Source sequence(s)
      BC121418
      UniProtKB/TrEMBL
      Q0V9R9
      Related
      ENSXETP00000044079.1, ENSXETT00000045399.1
      Conserved Domains (2) summary
      pfam03074
      Location:237609
      GCS; Glutamate-cysteine ligase
      cl28253
      Location:2270
      RpsA; Ribosomal protein S1 [Translation, ribosomal structure and biogenesis]

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030681.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      114262439..114291081 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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