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    CHST6 carbohydrate sulfotransferase 6 [ Gallus gallus (chicken) ]

    Gene ID: 770257, updated on 7-Jul-2018

    Summary

    Symbol
    CHST6provided by CGNC
    Full Name
    carbohydrate sulfotransferase 6provided by CGNC
    Primary source
    CGNC:55889
    See related
    Ensembl:ENSGALG00000000913
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CHST5
    Orthologs

    Genomic context

    See CHST6 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 11 NC_006098.5 (19917046..19926535)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 11 NC_006098.4 (20160472..20168822)

    Chromosome 11 - NC_006098.5Genomic Context describing neighboring genes Neighboring gene TERF2 interacting protein Neighboring gene lysyl-tRNA synthetase Neighboring gene adenosine deaminase, tRNA specific 1 Neighboring gene GABA type A receptor associated protein like 2 Neighboring gene transmembrane protein 231 Neighboring gene uncharacterized LOC107056827 Neighboring gene uncharacterized LOC112533294

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    carbohydrate sulfotransferase 5
    Names
    carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5
    carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
    NP_001269451.1
    XP_015148099.1
    XP_015148100.1
    XP_015148101.1
    XP_015148102.1
    XP_015148103.1
    XP_015148104.1
    XP_025009999.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001282522.1NP_001269451.1  carbohydrate sulfotransferase 5

      Status: VALIDATED

      Source sequence(s)
      AADN05000558
      UniProtKB/TrEMBL
      E1C5F3
      Related
      ENSGALP00000001340.3, ENSGALT00000001342.5
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006098.5 Reference GRCg6a Primary Assembly

      Range
      19917046..19926535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015292617.2XP_015148103.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Related
      ENSGALP00000063572.1
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    2. XM_025154231.1XP_025009999.1  carbohydrate sulfotransferase 5 isoform X1

      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    3. XM_015292613.2XP_015148099.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    4. XM_015292614.2XP_015148100.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    5. XM_015292615.2XP_015148101.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    6. XM_015292616.2XP_015148102.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
    7. XM_015292618.2XP_015148104.1  carbohydrate sulfotransferase 5 isoform X1

      UniProtKB/TrEMBL
      E1C5F3
      Conserved Domains (1) summary
      pfam13469
      Location:45298
      Sulfotransfer_3; Sulfotransferase family
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