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    pdpk1a 3-phosphoinositide dependent protein kinase 1a [ Danio rerio (zebrafish) ]

    Gene ID: 768202, updated on 12-Aug-2018

    Summary

    Official Symbol
    pdpk1aprovided by ZNC
    Official Full Name
    3-phosphoinositide dependent protein kinase 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-061013-109
    See related
    Ensembl:ENSDARG00000062304 Vega:OTTDARG00000035044
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    im:7158209; zgc:153787

    Genomic context

    See pdpk1a in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (45286086..45298487, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (47333752..47346153, complement)

    Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 31 Neighboring gene potassium channel tetramerization domain containing 5a Neighboring gene interleukin 21 receptor, tandem duplicate 2 Neighboring gene interleukin 21 receptor, tandem duplicate 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein serine/threonine kinase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    intracellular signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    peptidyl-serine phosphorylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    3-phosphoinositide-dependent protein kinase 1
    NP_001070812.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077344.1NP_001070812.1  3-phosphoinositide-dependent protein kinase 1 precursor

      See identical proteins and their annotated locations for NP_001070812.1

      Status: PROVISIONAL

      Source sequence(s)
      BC124736
      UniProtKB/TrEMBL
      Q08BG3
      Related
      ENSDARP00000093021.3, OTTDARP00000039068, ENSDART00000102245.5, OTTDART00000049797
      Conserved Domains (3) summary
      smart00220
      Location:77324
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      cd01262
      Location:429531
      PH_PDK1; 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain
      cd05581
      Location:75337
      STKc_PDK1; Catalytic domain of the Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007114.7 Reference GRCz11 Primary Assembly

      Range
      45286086..45298487 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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