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    vdr-b nuclear receptor VDR-b [ Ciona intestinalis (vase tunicate) ]

    Gene ID: 751590, updated on 23-Feb-2018

    Summary

    Gene symbol
    vdr-b
    Gene description
    nuclear receptor VDR-b
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Ciona intestinalis
    Lineage
    Eukaryota; Metazoa; Chordata; Tunicata; Ascidiacea; Enterogona; Phlebobranchia; Cionidae; Ciona
    Also known as
    Ci-VDR-b

    Genomic context

    See vdr-b in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current KH (GCF_000224145.2) 10 NC_020175.2 (2044392..2052749)

    Chromosome 10 - NC_020175.2Genomic Context describing neighboring genes Neighboring gene transcription initiation protein SPT3 homolog Neighboring gene sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like Neighboring gene doublesex- and mab-3-related transcription factor A2-like Neighboring gene uncharacterized LOC100177694

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_020175.2 Chromosome 10 Reference KH Primary Assembly

    General protein information

    Preferred Names
    nuclear receptor VDR-b
    Names
    VDR-b-like nuclear receptor
    vitamin D receptor b

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001044366.1NP_001037831.1  nuclear receptor VDR-b

      See identical proteins and their annotated locations for NP_001037831.1

      Status: PROVISIONAL

      Source sequence(s)
      BR000137
      UniProtKB/TrEMBL
      Q1RL97
      Conserved Domains (2) summary
      cd06929
      Location:185365
      NR_LBD_F1; Ligand-binding domain of nuclear receptor family 1
      cl02596
      Location:287
      NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

    RefSeqs of Annotated Genomes: Ciona intestinalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference KH Primary Assembly

    Genomic

    1. NC_020175.2 Reference KH Primary Assembly

      Range
      2044392..2052749
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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