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    EARS2 glutamyl-tRNA synthetase 2, mitochondrial [ Pan troglodytes (chimpanzee) ]

    Gene ID: 744351, updated on 7-Oct-2018

    Summary

    Official Symbol
    EARS2provided by VGNC
    Official Full Name
    glutamyl-tRNA synthetase 2, mitochondrialprovided by VGNC
    Primary source
    VGNC:VGNC:9031
    Locus tag
    CK820_G0046848
    See related
    Ensembl:ENSPTRG00000007887
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See EARS2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 16 NC_036895.1 (24982557..25017892, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 16 NC_006483.3 (23626282..23661602, complement)

    Chromosome 16 - NC_036895.1Genomic Context describing neighboring genes Neighboring gene component of oligomeric golgi complex 7 Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 2 Neighboring gene ubiquitin family domain containing 1 Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    • Homologs of the EARS2 gene: The EARS2 gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, A.thaliana, rice, and frog.
    • Orthologs from Annotation Pipeline: 250 organisms have orthologs with human gene EARS2

    General protein information

    Preferred Names
    probable glutamate--tRNA ligase, mitochondrial
    Names
    glutamyl-tRNA synthetase 2, mitochondrial (putative)
    XP_001162700.2
    XP_009428775.2
    XP_016785122.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036895.1 Reference Clint_PTRv2 Primary Assembly

      Range
      24982557..25017892 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001162700.5XP_001162700.2  probable glutamate--tRNA ligase, mitochondrial isoform X3

      Conserved Domains (1) summary
      PRK01406
      Location:37520
      gltX; glutamyl-tRNA synthetase; Reviewed
    2. XM_016929633.2XP_016785122.2  probable glutamate--tRNA ligase, mitochondrial isoform X1

      Conserved Domains (1) summary
      PRK01406
      Location:86559
      gltX; glutamyl-tRNA synthetase; Reviewed
    3. XM_009430500.3XP_009428775.2  probable glutamate--tRNA ligase, mitochondrial isoform X2

      Conserved Domains (1) summary
      PRK01406
      Location:37508
      gltX; glutamyl-tRNA synthetase; Reviewed

    RNA

    1. XR_674873.3 RNA Sequence

    2. XR_001710263.2 RNA Sequence

    3. XR_002939972.1 RNA Sequence

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