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    IKZF1 IKAROS family zinc finger 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 744299, updated on 4-Jun-2019

    Summary

    Official Symbol
    IKZF1provided by VGNC
    Official Full Name
    IKAROS family zinc finger 1provided by VGNC
    Primary source
    VGNC:VGNC:4399
    Locus tag
    CK820_G0031407
    See related
    Ensembl:ENSPTRG00000019187
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ZNFN1A1
    Orthologs

    Genomic context

    See IKZF1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 7 NC_036886.1 (50591246..50692247)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 7 NC_006474.4 (49737713..49838723)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 7 NC_006474.3 (49057355..49094410)

    Chromosome 7 - NC_036886.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107976065 Neighboring gene uncharacterized LOC107976066 Neighboring gene uncharacterized LOC107975799 Neighboring gene U6 spliceosomal RNA Neighboring gene fidgetin like 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    DNA-binding protein Ikaros
    Names
    DNA-binding protein Ikaros-like
    IKAROS family zinc finger 1 (Ikaros)
    zinc finger protein subfamily 1A member 1
    zinc finger protein, subfamily 1A, 1 (Ikaros)

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036886.1 Reference Clint_PTRv2 Primary Assembly

      Range
      50591246..50692247
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016957452.2XP_016812941.1  DNA-binding protein Ikaros isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    2. XM_016957457.2XP_016812946.1  DNA-binding protein Ikaros isoform X2

      UniProtKB/TrEMBL
      H2QUK7
      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    3. XM_016957469.2XP_016812958.1  DNA-binding protein Ikaros isoform X8

      Conserved Domains (2) summary
      COG5048
      Location:1131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
    4. XM_016957472.2XP_016812961.1  DNA-binding protein Ikaros isoform X10

      Conserved Domains (4) summary
      COG5048
      Location:1112
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:5880
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:7297
      zf-H2C2_2; Zinc-finger double domain
    5. XM_016957470.2XP_016812959.1  DNA-binding protein Ikaros isoform X8

      Conserved Domains (2) summary
      COG5048
      Location:1131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
    6. XM_016957453.2XP_016812942.1  DNA-binding protein Ikaros isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    7. XM_016957454.2XP_016812943.1  DNA-binding protein Ikaros isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    8. XM_016957474.2XP_016812963.1  DNA-binding protein Ikaros isoform X11

    9. XM_016957464.2XP_016812953.1  DNA-binding protein Ikaros isoform X6

    10. XM_016957471.2XP_016812960.1  DNA-binding protein Ikaros isoform X10

      Conserved Domains (4) summary
      COG5048
      Location:1112
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:5880
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:7297
      zf-H2C2_2; Zinc-finger double domain
    11. XM_016957473.2XP_016812962.1  DNA-binding protein Ikaros isoform X11

    12. XM_016957461.2XP_016812950.1  DNA-binding protein Ikaros isoform X4

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    13. XM_016957467.2XP_016812956.1  DNA-binding protein Ikaros isoform X8

      Related
      ENSPTRP00000080197.1
      Conserved Domains (2) summary
      COG5048
      Location:1131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
    14. XM_016957458.2XP_016812947.1  DNA-binding protein Ikaros isoform X3

    15. XM_016957460.2XP_016812949.1  DNA-binding protein Ikaros isoform X4

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    16. XM_016957468.2XP_016812957.1  DNA-binding protein Ikaros isoform X9

      Related
      ENSPTRP00000085611.1
      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    17. XM_016957466.2XP_016812955.1  DNA-binding protein Ikaros isoform X8

      Conserved Domains (2) summary
      COG5048
      Location:1131
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:6080
      ZF_C2H2; C2H2 Zn finger [structural motif]
    18. XM_016957459.2XP_016812948.1  DNA-binding protein Ikaros isoform X3

    19. XM_016957451.2XP_016812940.1  DNA-binding protein Ikaros isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    20. XM_016957463.2XP_016812952.1  DNA-binding protein Ikaros isoform X5

      Related
      ENSPTRP00000091286.1
      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    21. XM_016957450.2XP_016812939.1  DNA-binding protein Ikaros isoform X1

      Conserved Domains (2) summary
      sd00017
      Location:139159
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:152176
      zf-H2C2_2; Zinc-finger double domain
    22. XM_016957456.2XP_016812945.1  DNA-binding protein Ikaros isoform X2

      UniProtKB/TrEMBL
      H2QUK7
      Related
      ENSPTRP00000032781.4
      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    23. XM_016957462.2XP_016812951.1  DNA-binding protein Ikaros isoform X5

      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    24. XM_016957455.2XP_016812944.1  DNA-binding protein Ikaros isoform X2

      UniProtKB/TrEMBL
      H2QUK7
      Conserved Domains (2) summary
      sd00017
      Location:119139
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:132156
      zf-H2C2_2; Zinc-finger double domain
    25. XM_016957465.2XP_016812954.1  DNA-binding protein Ikaros isoform X7

      Conserved Domains (3) summary
      COG5048
      Location:72146
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:4767
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:6084
      zf-H2C2_2; Zinc-finger double domain
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