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    LOC739068 growth arrest-specific protein 6 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 739068, updated on 6-Oct-2018

    Summary

    Gene symbol
    LOC739068
    Gene description
    growth arrest-specific protein 6
    Locus tag
    CK820_G0054992
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan

    Genomic context

    See LOC739068 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) Unplaced Scaffold NW_019933025.1 (160097..207010)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 13 Unlocalized Scaffold NW_003473056.1 (109218..136653)

    NW_019933025.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112207452 Neighboring gene uncharacterized LOC100610027 Neighboring gene transmembrane protein 255B-like Neighboring gene uncharacterized LOC100608195

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • EGFR tyrosine kinase inhibitor resistance, organism-specific biosystem (from KEGG)
      EGFR tyrosine kinase inhibitor resistance, organism-specific biosystemEGFR is a tyrosine kinase that participates in the regulation of cellular homeostasis. EGFR also serves as a stimulus for cancer growth. EGFR gene mutations and protein overexpression, both of which ...
    • EGFR tyrosine kinase inhibitor resistance, conserved biosystem (from KEGG)
      EGFR tyrosine kinase inhibitor resistance, conserved biosystemEGFR is a tyrosine kinase that participates in the regulation of cellular homeostasis. EGFR also serves as a stimulus for cancer growth. EGFR gene mutations and protein overexpression, both of which ...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    growth arrest-specific protein 6

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NW_019933025.1 Reference Clint_PTRv2 Primary Assembly

      Range
      160097..207010
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024353505.1XP_024209273.1  growth arrest-specific protein 6

      Conserved Domains (7) summary
      smart00179
      Location:200230
      EGF_CA; Calcium-binding EGF-like domain
      cd00054
      Location:121156
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00110
      Location:301453
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam00594
      Location:5695
      Gla; Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain
      pfam02210
      Location:516654
      Laminin_G_2; Laminin G domain
      pfam12662
      Location:221244
      cEGF; Complement Clr-like EGF-like
      pfam14670
      Location:163198
      FXa_inhibition; Coagulation Factor Xa inhibitory site
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