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    GNPDA1 glucosamine-6-phosphate deaminase 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 738888, updated on 21-May-2019

    Summary

    Official Symbol
    GNPDA1provided by VGNC
    Official Full Name
    glucosamine-6-phosphate deaminase 1provided by VGNC
    Primary source
    VGNC:VGNC:4017
    Locus tag
    CK820_G0009950
    See related
    Ensembl:ENSPTRG00000017357
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See GNPDA1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (120180093..120192507, complement)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 5 NC_006472.4 (142040575..142052988, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (142760769..142773918, complement)

    Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104006584 Neighboring gene protocadherin 12 Neighboring gene ring finger protein 14 Neighboring gene 39S ribosomal protein L11, mitochondrial pseudogene Neighboring gene Nedd4 family interacting protein 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    glucosamine-6-phosphate isomerase 1
    XP_009448124.1
    XP_009448125.1
    XP_016809466.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

      Range
      120180093..120192507 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009449850.3XP_009448125.1  glucosamine-6-phosphate isomerase 1 isoform X2

      See identical proteins and their annotated locations for XP_009448125.1

      UniProtKB/TrEMBL
      H2QRP1
      Conserved Domains (1) summary
      cl00339
      Location:1253
      SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
    2. XM_016953977.2XP_016809466.1  glucosamine-6-phosphate isomerase 1 isoform X2

      UniProtKB/TrEMBL
      H2QRP1
      Related
      ENSPTRP00000029669.5
      Conserved Domains (1) summary
      cl00339
      Location:1253
      SugarP_isomerase; SugarP_isomerase: Sugar Phosphate Isomerase family; includes type A ribose 5-phosphate isomerase (RPI_A), glucosamine-6-phosphate (GlcN6P) deaminase, and 6-phosphogluconolactonase (6PGL). RPI catalyzes the reversible conversion of ribose-5-phosphate to ...
    3. XM_009449849.3XP_009448124.1  glucosamine-6-phosphate isomerase 1 isoform X1

      Conserved Domains (1) summary
      PRK00443
      Location:30287
      nagB; glucosamine-6-phosphate deaminase; Provisional
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