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    chaf1a.S chromatin assembly factor 1 subunit A S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 733264, updated on 5-Aug-2018

    Summary

    Symbol
    chaf1a.S
    Full Name
    chromatin assembly factor 1 subunit A S homeolog
    Primary source
    Xenbase:XB-GENE-1001158
    Locus tag
    XELAEV_18009664mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    xp150; chaf1a; caip150; chaf1a-b

    Genomic context

    See chaf1a.S in Genome Data Viewer
    Location:
    chromosome: 1S
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (78820400..78867103, complement)

    Chromosome 1S - NC_030725.1Genomic Context describing neighboring genes Neighboring gene hepatoma-derived growth factor-related protein 2-like Neighboring gene UBX domain protein 6 S homeolog Neighboring gene endophilin-A2-like Neighboring gene MPN domain containing S homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030725.1 Chromosome 1S Reference Xenopus_laevis_v2 Primary Assembly

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    chromatin assembly factor 1 subunit A-B
    Names
    CAF-1 subunit A
    CAF-I 150 kDa subunit B
    CAF-I p150-B
    CAF-Ip150-B
    Chromatin assembly factor I p150 subunit B
    chromatin assembly factor 1, subunit A (p150)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001095620.1NP_001089089.1  chromatin assembly factor 1 subunit A-B

      See identical proteins and their annotated locations for NP_001089089.1

      Status: PROVISIONAL

      Source sequence(s)
      BC125993
      UniProtKB/Swiss-Prot
      A0JMT0
      Conserved Domains (4) summary
      pfam11600
      Location:241394
      CAF-1_p150; Chromatin assembly factor 1 complex p150 subunit, N-terminal
      pfam12253
      Location:486529
      CAF1A; Chromatin assembly factor 1 subunit A
      pfam15539
      Location:596855
      CAF1-p150_C2; CAF1 complex subunit p150, region binding to CAF1-p60 at C-term
      pfam15557
      Location:10121
      CAF1-p150_N; CAF1 complex subunit p150, region binding to PCNA

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030725.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      78820400..78867103 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018239114.1XP_018094603.1  chromatin assembly factor 1 subunit A-B isoform X1

      UniProtKB/Swiss-Prot
      A0JMT0
      UniProtKB/TrEMBL
      A0A1L8HMX3
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