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    GDAP1 ganglioside induced differentiation associated protein 1 [ Bos taurus (cattle) ]

    Gene ID: 613472, updated on 2-Oct-2018

    Summary

    Official Symbol
    GDAP1provided by VGNC
    Official Full Name
    ganglioside induced differentiation associated protein 1provided by VGNC
    Primary source
    VGNC:VGNC:29295
    See related
    BGD:BT23371; Ensembl:ENSBTAG00000012608
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See GDAP1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 14 NC_037341.1 (37626569..37645629)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 14 AC_000171.1 (39757054..39776014)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene junctophilin 1 Neighboring gene uncharacterized LOC104974055 Neighboring gene peptidase inhibitor 15 Neighboring gene cysteine rich secretory protein LCCL domain containing 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    mitochondrial fission ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    protein targeting to mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    response to retinoic acid IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of mitochondrial outer membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
     

    General protein information

    Preferred Names
    ganglioside-induced differentiation-associated protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101222.2NP_001094692.1  ganglioside-induced differentiation-associated protein 1

      See identical proteins and their annotated locations for NP_001094692.1

      Status: VALIDATED

      Source sequence(s)
      BC150048, NKLS02000014
      UniProtKB/Swiss-Prot
      A6QQZ0
      Related
      ENSBTAP00000016739.5, ENSBTAT00000016739.5
      Conserved Domains (3) summary
      cd10303
      Location:179289
      GST_C_GDAP1; C-terminal, alpha helical domain of Ganglioside-induced differentiation-associated protein 1
      COG0625
      Location:26292
      GstA; Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones]
      cd03052
      Location:2698
      GST_N_GDAP1; GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have ...

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      37626569..37645629
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025001727.1XP_024857495.1  ganglioside-induced differentiation-associated protein 1 isoform X1

      Conserved Domains (2) summary
      cd03052
      Location:2698
      GST_N_GDAP1; GST_N family, Ganglioside-induced differentiation-associated protein 1 (GDAP1) subfamily; GDAP1 was originally identified as a highly expressed gene at the differentiated stage of GD3 synthase-transfected cells. More recently, mutations in GDAP1 have ...
      cl02776
      Location:179288
      GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
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