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    PSD3 pleckstrin and Sec7 domain containing 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 606759, updated on 7-Oct-2019

    Summary

    Official Symbol
    PSD3provided by VGNC
    Official Full Name
    pleckstrin and Sec7 domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:57309
    See related
    Ensembl:ENSCAFG00000005301
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See PSD3 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 16 NC_006598.3 (21328491..21921378, complement)

    Chromosome 16 - NC_006598.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090199 Neighboring gene methylsterol monooxygenase 1 pseudogene Neighboring gene uncharacterized LOC111090268 Neighboring gene uncharacterized LOC111090269 Neighboring gene ubiquitin-conjugating enzyme E2 E1-like Neighboring gene uncharacterized LOC111090270 Neighboring gene keratin, type I cytoskeletal 18 pseudogene

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006598.3 Chromosome 16 Reference CanFam3.1 Primary Assembly

    Pathways from PubChem

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    PH and SEC7 domain-containing protein 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006598.3 Reference CanFam3.1 Primary Assembly

      Range
      21328491..21921378 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005629758.3XP_005629815.2  PH and SEC7 domain-containing protein 3 isoform X2

      Related
      ENSCAFP00000055550.1, ENSCAFT00000076841.1
      Conserved Domains (2) summary
      cd00171
      Location:808962
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:10071132
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    2. XM_022403940.1XP_022259648.1  PH and SEC7 domain-containing protein 3 isoform X3

      Related
      ENSCAFP00000048490.1, ENSCAFT00000091990.1
      Conserved Domains (2) summary
      cd00171
      Location:557711
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:756881
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    3. XM_022403941.1XP_022259649.1  PH and SEC7 domain-containing protein 3 isoform X4

      Related
      ENSCAFP00000052576.1, ENSCAFT00000093313.1
      Conserved Domains (2) summary
      cd00171
      Location:540694
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:739864
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    4. XM_022403943.1XP_022259651.1  PH and SEC7 domain-containing protein 3 isoform X6

      Conserved Domains (2) summary
      cd00171
      Location:59213
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:258383
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    5. XM_022403942.1XP_022259650.1  PH and SEC7 domain-containing protein 3 isoform X5

      Conserved Domains (2) summary
      cd00171
      Location:77231
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:276401
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    6. XM_022403944.1XP_022259652.1  PH and SEC7 domain-containing protein 3 isoform X7

      Related
      ENSCAFP00000053252.1, ENSCAFT00000060793.1
      Conserved Domains (2) summary
      cd00171
      Location:57211
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:256381
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain
    7. XM_022403939.1XP_022259647.1  PH and SEC7 domain-containing protein 3 isoform X1

      Conserved Domains (2) summary
      cd00171
      Location:808962
      Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
      cd13295
      Location:10071132
      PH_EFA6; Exchange Factor for ARF6 Pleckstrin homology (PH) domain

    RNA

    1. XR_002614603.1 RNA Sequence

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