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    ARL6IP5 ADP ribosylation factor like GTPase 6 interacting protein 5 [ Sus scrofa (pig) ]

    Gene ID: 595127, updated on 11-Jun-2019

    Summary

    Gene symbol
    ARL6IP5
    Gene description
    ADP ribosylation factor like GTPase 6 interacting protein 5
    See related
    Ensembl:ENSSSCG00000033154
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus
    Annotation information
    Annotation category: partial on reference assembly
    Expression
    Ubiquitous expression in heart (RPKM 80.3), subcutaneous adipose (RPKM 51.3) and 8 other tissues See more
    Orthologs

    Genomic context

    See ARL6IP5 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (50509777..50538004)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 13 NC_010455.4 (55664791..55668851)

    Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene TATA element modulatory factor 1 Neighboring gene ubiquitin like modifier activating enzyme 3 Neighboring gene leiomodin 3 Neighboring gene uncharacterized LOC110256266

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Gene Ontology Provided by GO

    Component Evidence Code Pubs
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    PRA1 family protein 3
    Names
    ADP-ribosylation factor-like protein 6-interacting protein 5
    ADP-ribosylation-like factor 6 interacting protein 5
    ARL-6-interacting protein 5
    PRA1 family protein-like protein
    aip-5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001048073.1NP_001041538.1  PRA1 family protein 3

      See identical proteins and their annotated locations for NP_001041538.1

      Status: PROVISIONAL

      Source sequence(s)
      AY864608
      UniProtKB/Swiss-Prot
      Q56P28
      Related
      ENSSSCP00000036690.1, ENSSSCT00000037977.1
      Conserved Domains (1) summary
      pfam03208
      Location:5148
      PRA1; PRA1 family protein

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

      Range
      50509777..50538004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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