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    LOC583227 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 583227, updated on 8-Apr-2017

    Summary

    Gene symbol
    LOC583227
    Gene description
    serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus
    Also known as
    ppp2r1a

    Genomic context

    See LOC583227 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    101 current Spur_4.2 (GCF_000002235.4) Unplaced Scaffold NW_011969839.1 (46710..71716)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577975.1 (83284..102108, complement)

    NW_011969839.1Genomic Context describing neighboring genes Neighboring gene deleted in malignant brain tumors 1 protein-like Neighboring gene zinc finger protein 135-like Neighboring gene complement related-short precursor

    Genomic regions, transcripts, and products

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • TGF-beta signaling pathway, organism-specific biosystem (from KEGG)
      TGF-beta signaling pathway, organism-specific biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...
    • TGF-beta signaling pathway, conserved biosystem (from KEGG)
      TGF-beta signaling pathway, conserved biosystemThe transforming growth factor-beta (TGF-beta) family members, which include TGF-betas, activins and bone morphogenetic proteins (BMPs), are structurally related secreted cytokines found in species r...
    • mRNA surveillance pathway, organism-specific biosystem (from KEGG)
      mRNA surveillance pathway, organism-specific biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...
    • mRNA surveillance pathway, conserved biosystem (from KEGG)
      mRNA surveillance pathway, conserved biosystemThe mRNA surveillance pathway is a quality control mechanism that detects and degrades abnormal mRNAs. These pathways include nonsense-mediated mRNA decay (NMD), nonstop mRNA decay (NSD), and no-go ...

    General protein information

    Preferred Names
    serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform
    Names
    protein phosphatase 2, regulatory subunit A, alpha

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_4.2 Primary Assembly

    Genomic

    1. NW_011969839.1 Reference Spur_4.2 Primary Assembly

      Range
      46710..71716
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011664159.1XP_011662461.1  serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X3

      Conserved Domains (3) summary
      pfam13646
      Location:368469
      HEAT_2; HEAT repeats
      sd00044
      Location:247271
      HEAT; HEAT repeat [structural motif]
      cl21736
      Location:316507
      TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    2. XM_011664147.1XP_011662449.1  serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X1

      See identical proteins and their annotated locations for XP_011662449.1

      Conserved Domains (3) summary
      pfam13646
      Location:368469
      HEAT_2; HEAT repeats
      sd00044
      Location:247271
      HEAT; HEAT repeat [structural motif]
      cl21736
      Location:316507
      TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
    3. XM_011664155.1XP_011662457.1  serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform isoform X2

      See identical proteins and their annotated locations for XP_011662457.1

      Conserved Domains (3) summary
      pfam13646
      Location:368469
      HEAT_2; HEAT repeats
      sd00044
      Location:247271
      HEAT; HEAT repeat [structural motif]
      cl21736
      Location:316507
      TAF6; TATA Binding Protein (TBP) Associated Factor 6 (TAF6) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
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