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    p2rx3a purinergic receptor P2X, ligand-gated ion channel, 3a [ Danio rerio (zebrafish) ]

    Gene ID: 58147, updated on 30-Jun-2019

    Summary

    Official Symbol
    p2rx3aprovided by ZNC
    Official Full Name
    purinergic receptor P2X, ligand-gated ion channel, 3aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-000427-3
    See related
    Ensembl:ENSDARG00000010477
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    p2x3; p2rx3; zP2X3; zfP2X3; fb99b08; wu:fb99b08
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See p2rx3a in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (21944259..21959712, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (21647014..21662467, complement)
    103 previous assembly Zv9 (GCF_000002035.4) 14 NC_007125.5 (22947526..22962979, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene RAD9 checkpoint clamp component A Neighboring gene zgc:113229 Neighboring gene structure specific recognition protein 1a Neighboring gene cardiotrophin-like cytokine factor 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    ATP-gated ion channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    extracellularly ATP-gated cation channel activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    extracellularly ATP-gated cation channel activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    extracellularly ATP-gated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    extracellularly ATP-gated cation channel activity IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    ion channel activity IEA
    Inferred from Electronic Annotation
    more info
     
    purinergic nucleotide receptor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    purinergic nucleotide receptor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    cation transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
     
    cation transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cation transport IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cation transport IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    ion transmembrane transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    ion transport IEA
    Inferred from Electronic Annotation
    more info
     
    neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    protein heterooligomerization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    response to ATP IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    integral component of nuclear inner membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    purinergic receptor P2X3
    Names
    zP2X3.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_131623.1NP_571698.1  purinergic receptor P2X3

      See identical proteins and their annotated locations for NP_571698.1

      Status: PROVISIONAL

      Source sequence(s)
      AF238292
      UniProtKB/TrEMBL
      Q9I8N8
      Related
      ENSDARP00000019781.7, ENSDART00000021417.9
      Conserved Domains (1) summary
      pfam00864
      Location:13372
      P2X_receptor; ATP P2X receptor

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      21944259..21959712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394904.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      149627..161072 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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