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    Golga7 golgi autoantigen, golgin subfamily a, 7 [ Mus musculus (house mouse) ]

    Gene ID: 57437, updated on 9-Sep-2018

    Summary

    Official Symbol
    Golga7provided by MGI
    Official Full Name
    golgi autoantigen, golgin subfamily a, 7provided by MGI
    Primary source
    MGI:MGI:1931029
    See related
    Ensembl:ENSMUSG00000015341 Vega:OTTMUSG00000029863
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    GCP16; R75586; HSPC041; AB041568; GOLGA3AP1; C130038N16Rik
    Expression
    Ubiquitous expression in CNS E14 (RPKM 35.4), limb E14.5 (RPKM 33.1) and 28 other tissues See more
    Orthologs

    Genomic context

    See Golga7 in Genome Data Viewer
    Location:
    8; 8 A2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 8 NC_000074.6 (23241326..23257434, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (24351798..24367552, complement)

    Chromosome 8 - NC_000074.6Genomic Context describing neighboring genes Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene GINS complex subunit 4 (Sld5 homolog) Neighboring gene predicted gene, 39141 Neighboring gene predicted gene, 30370 Neighboring gene secreted frizzled-related protein 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Clone Names

    • MGC30271, MGC102434, MGC118465

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    contributes_to protein-cysteine S-palmitoyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    Golgi to plasma membrane protein transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi to plasma membrane protein transport ISO
    Inferred from Sequence Orthology
    more info
     
    Golgi to plasma membrane transport ISO
    Inferred from Sequence Orthology
    more info
     
    peptidyl-L-cysteine S-palmitoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    peptidyl-L-cysteine S-palmitoylation ISO
    Inferred from Sequence Orthology
    more info
     
    protein stabilization ISO
    Inferred from Sequence Orthology
    more info
     
    protein targeting to membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    Golgi stack IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Golgi stack ISO
    Inferred from Sequence Orthology
    more info
     
    intrinsic component of Golgi membrane ISO
    Inferred from Sequence Orthology
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    palmitoyltransferase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    palmitoyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    golgin subfamily A member 7

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001042484.1NP_001035949.1  golgin subfamily A member 7

      See identical proteins and their annotated locations for NP_001035949.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC126038, AK150696, BY330336
      Consensus CDS
      CCDS40297.1
      UniProtKB/Swiss-Prot
      Q91W53
      Related
      ENSMUSP00000062983.6, OTTMUSP00000038461, ENSMUST00000051094.8, OTTMUST00000074108
      Conserved Domains (1) summary
      pfam10256
      Location:12124
      Erf4; Golgin subfamily A member 7/ERF4 family
    2. NM_020585.2NP_065610.2  golgin subfamily A member 7

      See identical proteins and their annotated locations for NP_065610.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC126038, AK150696, BY330336
      Consensus CDS
      CCDS40297.1
      UniProtKB/Swiss-Prot
      Q91W53
      Related
      ENSMUSP00000112935.1, OTTMUSP00000038462, ENSMUST00000121783.6, OTTMUST00000074109
      Conserved Domains (1) summary
      pfam10256
      Location:12124
      Erf4; Golgin subfamily A member 7/ERF4 family

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000074.6 Reference GRCm38.p4 C57BL/6J

      Range
      23241326..23257434 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006509179.3XP_006509242.1  golgin subfamily A member 7 isoform X1

      See identical proteins and their annotated locations for XP_006509242.1

      Conserved Domains (1) summary
      pfam10256
      Location:12123
      Erf4; Golgin subfamily A member 7/ERF4 family
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