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    nedd8 neural precursor cell expressed, developmentally down-regulated 8 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 549727, updated on 9-Oct-2019

    Summary

    Symbol
    nedd8provided by Xenbase
    Full Name
    neural precursor cell expressed, developmentally down-regulated 8provided by Xenbase
    Primary source
    Xenbase:XB-GENE-6067551
    See related
    Ensembl:ENSXETG00000012953
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana

    Genomic context

    See nedd8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (127045562..127048264)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668232.1 (86450428..86453130, complement)

    Chromosome 1 - NC_030677.1Genomic Context describing neighboring genes Neighboring gene transglutaminase 1 Neighboring gene guanosine monophosphate reductase 2 Neighboring gene uncharacterized LOC105948573 Neighboring gene transmembrane 9 superfamily member 1 Neighboring gene importin 4 Neighboring gene uncharacterized LOC100486385

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    • Homologs of the nedd8 gene: The nedd8 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, and N.crassa.
    • Orthologs

    General protein information

    Preferred Names
    neural precursor cell expressed, developmentally down-regulated 8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016973.2NP_001016973.1  neural precursor cell expressed, developmentally down-regulated 8

      See identical proteins and their annotated locations for NP_001016973.1

      Status: PROVISIONAL

      Source sequence(s)
      CR848418
      UniProtKB/TrEMBL
      Q28E73
      Related
      ENSXETP00000037453.1, ENSXETT00000039140.1
      Conserved Domains (1) summary
      cd01806
      Location:176
      Nedd8; Nebb8-like ubiquitin protein

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030677.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      127045562..127048264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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