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    vps33b vacuolar protein sorting 33B [ Danio rerio (zebrafish) ]

    Gene ID: 541534, updated on 1-Aug-2018

    Summary

    Official Symbol
    vps33bprovided by ZNC
    Official Full Name
    vacuolar protein sorting 33Bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-050327-73
    See related
    Ensembl:ENSDARG00000044813 Vega:OTTDARG00000027411
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:110803
    Orthologs

    Genomic context

    See vps33b in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (50376097..50395367, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (50103321..50122591, complement)

    Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat domain 17 Neighboring gene protein regulator of cytokinesis 1b Neighboring gene HD domain containing 3 Neighboring gene microfibril associated protein 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    intrahepatic bile duct development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    intrahepatic bile duct development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    protein transport IEA
    Inferred from Electronic Annotation
    more info
     
    vesicle docking involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    late endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
     
    lysosome IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    vacuolar protein sorting-associated protein 33B
    Names
    vacuolar sorting protein 33b

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001014348.1NP_001014370.1  vacuolar protein sorting-associated protein 33B

      See identical proteins and their annotated locations for NP_001014370.1

      Status: PROVISIONAL

      Source sequence(s)
      BC091824
      UniProtKB/Swiss-Prot
      Q58EN8
      Related
      ENSDARP00000065867.4, OTTDARP00000029546, ENSDART00000065868.5, OTTDART00000036857
      Conserved Domains (1) summary
      pfam00995
      Location:37605
      Sec1; Sec1 family

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007118.7 Reference GRCz11 Primary Assembly

      Range
      50376097..50395367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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