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    HCN3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 [ Bos taurus (cattle) ]

    Gene ID: 539578, updated on 14-Jan-2019

    Summary

    Official Symbol
    HCN3provided by VGNC
    Official Full Name
    hyperpolarization activated cyclic nucleotide gated potassium channel 3provided by VGNC
    Primary source
    VGNC:VGNC:29778
    See related
    BGD:BT15729; Ensembl:ENSBTAG00000017055
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See HCN3 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 3 NC_037330.1 (15354861..15363825, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 3 AC_000160.1 (15409813..15418775, complement)

    Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene farnesyl diphosphate synthase Neighboring gene pyruvate kinase L/R Neighboring gene CDC like kinase 2 Neighboring gene secretory carrier membrane protein 3

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192278.2NP_001179207.2  potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000003
      Related
      ENSBTAP00000022679.4, ENSBTAT00000022679.5
      Conserved Domains (4) summary
      cd00038
      Location:430538
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
      pfam08412
      Location:5193
      Ion_trans_N; Ion transport protein N-terminal
      cl26073
      Location:86519
      Ank_2; Ankyrin repeats (3 copies)
      cl26464
      Location:601778
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037330.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      15354861..15363825 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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