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    ASB16 ankyrin repeat and SOCS box containing 16 [ Bos taurus (cattle) ]

    Gene ID: 539253, updated on 8-Aug-2018

    Summary

    Official Symbol
    ASB16provided by VGNC
    Official Full Name
    ankyrin repeat and SOCS box containing 16provided by VGNC
    Primary source
    VGNC:VGNC:26193
    See related
    BGD:BT27674; Ensembl:ENSBTAG00000019658
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See ASB16 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 19 NC_037346.1 (43989607..43997145)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 19 AC_000176.1 (44614052..44621590)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene histone deacetylase 5 Neighboring gene chromosome 19 C17orf53 homolog Neighboring gene transmembrane and ubiquitin like domain containing 2 Neighboring gene homeobox protein CDX-1-like Neighboring gene ataxin 7 like 3

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    ankyrin repeat and SOCS box protein 16

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101188.1NP_001094658.1  ankyrin repeat and SOCS box protein 16

      See identical proteins and their annotated locations for NP_001094658.1

      Status: PROVISIONAL

      Source sequence(s)
      BC147924
      UniProtKB/TrEMBL
      A6QLD4
      Related
      ENSBTAP00000026197.3, ENSBTAT00000026197.3
      Conserved Domains (4) summary
      cd00204
      Location:114228
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      cd03716
      Location:406447
      SOCS_ASB_like; SOCS (suppressors of cytokine signaling) box of ASB (ankyrin repeat and SOCS box) and SSB (SPRY domain-containing SOCS box proteins) protein families. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence of a variable ...
      pfam12796
      Location:147239
      Ank_2; Ankyrin repeats (3 copies)
      sd00045
      Location:143173
      ANK; ANK repeat [structural motif]

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      43989607..43997145
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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