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    THRA thyroid hormone receptor alpha [ Bos taurus (cattle) ]

    Gene ID: 532621, updated on 9-Jan-2020

    Summary

    Official Symbol
    THRAprovided by VGNC
    Official Full Name
    thyroid hormone receptor alphaprovided by VGNC
    Primary source
    VGNC:VGNC:35845
    See related
    BGD:BT12909; Ensembl:ENSBTAG00000010745
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See THRA in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 19 NC_037346.1 (40366050..40390931)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 19 AC_000176.1 (41017136..41042025)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD124 Neighboring gene colony stimulating factor 3 Neighboring gene mediator complex subunit 24 Neighboring gene nuclear receptor subfamily 1 group D member 1 Neighboring gene MSL complex subunit 1 Neighboring gene CASC3 exon junction complex subunit

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Markers

    Homology

    Clone Names

    • MGC137819

    General protein information

    Preferred Names
    thyroid hormone receptor alpha
    Names
    thyroid hormone receptor, alpha (erythroblastic leukemia viral (v-erb-a) oncogene homolog, avian)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046329.1NP_001039794.1  thyroid hormone receptor alpha

      See identical proteins and their annotated locations for NP_001039794.1

      Status: PROVISIONAL

      Source sequence(s)
      BC114725
      UniProtKB/TrEMBL
      Q1RMT4
      Related
      ENSBTAP00000014236.3, ENSBTAT00000014236.4
      Conserved Domains (2) summary
      cd06935
      Location:162370
      NR_LBD_TR; The ligand binding domain of thyroid hormone receptor, a members of a superfamily of nuclear receptors
      cd06961
      Location:52138
      NR_DBD_TR; DNA-binding domain of thyroid hormone receptors (TRs) is composed of two C4-type zinc fingers

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      40366050..40390931
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005220734.4XP_005220791.1  thyroid hormone receptor alpha isoform X1

      See identical proteins and their annotated locations for XP_005220791.1

      Conserved Domains (2) summary
      cd06935
      Location:162404
      NR_LBD_TR; The ligand binding domain of thyroid hormone receptor, a members of a superfamily of nuclear receptors
      cd06961
      Location:52138
      NR_DBD_TR; DNA-binding domain of thyroid hormone receptors (TRs) is composed of two C4-type zinc fingers
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