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    NPTX1 neuronal pentraxin 1 [ Bos taurus (cattle) ]

    Gene ID: 513538, updated on 8-Aug-2018

    Summary

    Official Symbol
    NPTX1provided by VGNC
    Official Full Name
    neuronal pentraxin 1provided by VGNC
    Primary source
    VGNC:VGNC:32218
    See related
    BGD:BT12454; Ensembl:ENSBTAG00000008940
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See NPTX1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 19 NC_037346.1 (52059956..52066350)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 19 AC_000176.1 (52679104..52685498)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene charged multivesicular body protein 6 Neighboring gene U1 spliceosomal RNA Neighboring gene regulatory associated protein of MTOR complex 1 Neighboring gene endonuclease V Neighboring gene E3 ubiquitin-protein ligase RNF213 Neighboring gene ring finger protein 213-like Neighboring gene transfer RNA glycine (anticodon CCC)

    Genomic regions, transcripts, and products

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001192354.1NP_001179283.1  neuronal pentraxin-1 precursor

      See identical proteins and their annotated locations for NP_001179283.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000019
      UniProtKB/TrEMBL
      E1BIM6
      Related
      ENSBTAP00000011769.5, ENSBTAT00000011769.5
      Conserved Domains (2) summary
      smart00159
      Location:222428
      PTX; Pentraxin / C-reactive protein / pentaxin family
      cl25732
      Location:52221
      SMC_N; RecF/RecN/SMC N terminal domain

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      52059956..52066350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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