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    CLEC12A C-type lectin domain family 12 member A [ Bos taurus (cattle) ]

    Gene ID: 508740, updated on 14-Jan-2019

    Summary

    Official Symbol
    CLEC12Aprovided by VGNC
    Official Full Name
    C-type lectin domain family 12 member Aprovided by VGNC
    Primary source
    VGNC:VGNC:27423
    See related
    BGD:BT18950; Ensembl:ENSBTAG00000012815
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See CLEC12A in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 5 NC_037332.1 (99947392..99963231)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 5 AC_000162.1 (100388575..100404409)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 1 member B Neighboring gene C-type lectin domain family 12 member B Neighboring gene uncharacterized LOC785168 Neighboring gene C-type lectin domain family 2 member B-like

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    Clone Names

    • MGC179455

    General protein information

    Preferred Names
    C-type lectin domain family 12 member A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001105345.2NP_001098815.1  C-type lectin domain family 12 member A

      See identical proteins and their annotated locations for NP_001098815.1

      Status: PROVISIONAL

      Source sequence(s)
      BC151519
      UniProtKB/TrEMBL
      A8E4Q7
      Related
      ENSBTAP00000017022.5, ENSBTAT00000017022.6
      Conserved Domains (1) summary
      cd03593
      Location:126244
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      99947392..99963231
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010805530.2XP_010803832.1  C-type lectin domain family 12 member A isoform X5

      Conserved Domains (1) summary
      cd03593
      Location:133251
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    2. XM_024991538.1XP_024847306.1  C-type lectin domain family 12 member A isoform X2

      Related
      ENSBTAP00000056650.1, ENSBTAT00000070472.1
      Conserved Domains (1) summary
      cd03593
      Location:155273
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    3. XM_024991537.1XP_024847305.1  C-type lectin domain family 12 member A isoform X1

      Conserved Domains (1) summary
      cd03593
      Location:155273
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    4. XM_024991541.1XP_024847309.1  C-type lectin domain family 12 member A isoform X6

      Conserved Domains (1) summary
      cd03593
      Location:116234
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    5. XM_024991540.1XP_024847308.1  C-type lectin domain family 12 member A isoform X4

      Conserved Domains (1) summary
      cd03593
      Location:148266
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
    6. XM_024991539.1XP_024847307.1  C-type lectin domain family 12 member A isoform X3

      Conserved Domains (1) summary
      cd03593
      Location:154272
      CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

    RNA

    1. XR_003034561.1 RNA Sequence

    2. XR_003034562.1 RNA Sequence

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