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    acsl5 acyl-CoA synthetase long chain family member 5 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496479, updated on 20-Jun-2018

    Summary

    Symbol
    acsl5provided by Xenbase
    Full Name
    acyl-CoA synthetase long chain family member 5provided by Xenbase
    Primary source
    Xenbase:XB-GENE-963158
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    acs2; acs5; facl5
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs

    Genomic context

    See acsl5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683413.1 (724273..729083, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668240.1 (1013144..1017954)

    NW_016683413.1Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene zinc finger DHHC-type containing 6

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    long-chain-fatty-acid--CoA ligase 5
    NP_001011069.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001011069.1NP_001011069.1  long-chain-fatty-acid--CoA ligase 5

      See identical proteins and their annotated locations for NP_001011069.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084450
      UniProtKB/TrEMBL
      Q5XGI9
      Conserved Domains (1) summary
      cd05927
      Location:102678
      LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NW_016683413.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      724273..729083 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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