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    lamb2.L laminin subunit beta 2 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 494988, updated on 8-Apr-2017

    Summary

    Symbol
    lamb2.L
    Full Name
    laminin subunit beta 2 L homeolog
    Primary source
    Xenbase:XB-GENE-5935979
    Locus tag
    XELAEV_18024042mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    lams; lamb1; lamb2

    Genomic context

    See lamb2.L in Genome Data Viewer
    Location:
    chromosome: 4L
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (132909978..132998586, complement)

    Chromosome 4L - NC_030730.1Genomic Context describing neighboring genes Neighboring gene sodium- and chloride-dependent creatine transporter 1-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 19-like Neighboring gene laminin subunit beta-4-like Neighboring gene coiled-coil domain containing 71 L homeolog

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030730.1 Chromosome 4L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • ECM-receptor interaction, organism-specific biosystem (from KEGG)
      ECM-receptor interaction, organism-specific biosystemThe extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell ...
    • ECM-receptor interaction, conserved biosystem (from KEGG)
      ECM-receptor interaction, conserved biosystemThe extracellular matrix (ECM) consists of a complex mixture of structural and functional macromolecules and serves an important role in tissue and organ morphogenesis and in the maintenance of cell ...
    • Focal adhesion, organism-specific biosystem (from KEGG)
      Focal adhesion, organism-specific biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...
    • Focal adhesion, conserved biosystem (from KEGG)
      Focal adhesion, conserved biosystemCell-matrix adhesions play essential roles in important biological processes including cell motility, cell proliferation, cell differentiation, regulation of gene expression and cell survival. At the...

    General protein information

    Preferred Names
    laminin subunit beta 2 L homeolog
    Names
    laminin beta 2
    laminin, beta 1
    laminin, beta 2 (laminin S)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001094695.1NP_001088164.1  laminin subunit beta 2 L homeolog precursor

      See identical proteins and their annotated locations for NP_001088164.1

      Status: PROVISIONAL

      Source sequence(s)
      BC084071
      UniProtKB/TrEMBL
      Q5XHI6
      Conserved Domains (8) summary
      cd07307
      Location:16171783
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
      smart00180
      Location:768813
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00055
      Location:457508
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam00053
      Location:816864
      Laminin_EGF; Laminin EGF domain
      pfam00055
      Location:45269
      Laminin_N; Laminin N-terminal (Domain VI)
      pfam01442
      Location:14461615
      Apolipoprotein; Apolipoprotein A1/A4/E domain
      pfam04871
      Location:15321658
      Uso1_p115_C; Uso1 / p115 like vesicle tethering protein, C terminal region
      pfam10211
      Location:14451510
      Ax_dynein_light; Axonemal dynein light chain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030730.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      132909978..132998586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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