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    SNF8 SNF8, ESCRT-II complex subunit [ Canis lupus familiaris (dog) ]

    Gene ID: 491063, updated on 26-Sep-2018

    Summary

    Official Symbol
    SNF8provided by VGNC
    Official Full Name
    SNF8, ESCRT-II complex subunitprovided by VGNC
    Primary source
    VGNC:VGNC:46601
    See related
    Ensembl:ENSCAFG00000016893
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See SNF8 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 9 NC_006591.3 (25151992..25162105, complement)

    Chromosome 9 - NC_006591.3Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit c locus 1 Neighboring gene ubiquitin conjugating enzyme E2 Z Neighboring gene gastric inhibitory polypeptide Neighboring gene insulin like growth factor 2 mRNA binding protein 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006591.3 Chromosome 9 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • ESCRT-II complex, organism-specific biosystem (from KEGG)
      ESCRT-II complex, organism-specific biosystemStructural complex; Genetic information processing; Protein processing
    • ESCRT-II complex, conserved biosystem (from KEGG)
      ESCRT-II complex, conserved biosystemStructural complex; Genetic information processing; Protein processing
    • Endocytosis, organism-specific biosystem (from KEGG)
      Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
    • Endocytosis, conserved biosystem (from KEGG)
      Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...

    General gene information

    Homology

    General protein information

    Preferred Names
    vacuolar-sorting protein SNF8
    Names
    SNF8, ESCRT-II complex subunit, homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006591.3 Reference CanFam3.1 Primary Assembly

      Range
      25151992..25162105 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_548183.6XP_548183.2  vacuolar-sorting protein SNF8 isoform X1

      See identical proteins and their annotated locations for XP_548183.2

      UniProtKB/TrEMBL
      E2RTF6
      Related
      ENSCAFP00000024849.3, ENSCAFT00000026744.3
      Conserved Domains (1) summary
      pfam04157
      Location:6225
      EAP30; EAP30/Vps36 family
    2. XM_022423077.1XP_022278785.1  vacuolar-sorting protein SNF8 isoform X2

      Conserved Domains (1) summary
      pfam04157
      Location:6213
      EAP30; EAP30/Vps36 family
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