Format

Send to:

Choose Destination
    • Showing Current items.

    ATF6 activating transcription factor 6 [ Canis lupus familiaris (dog) ]

    Gene ID: 488660, updated on 26-Sep-2018

    Summary

    Official Symbol
    ATF6provided by VGNC
    Official Full Name
    activating transcription factor 6provided by VGNC
    Primary source
    VGNC:VGNC:38212
    See related
    Ensembl:ENSCAFG00000013068
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See ATF6 in Genome Data Viewer
    Location:
    chromosome: 38
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 38 NC_006620.3 (20705167..20903852, complement)

    Chromosome 38 - NC_006620.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102155091 Neighboring gene uncharacterized LOC111094525 Neighboring gene olfactomedin like 2B Neighboring gene uncharacterized LOC111094516 Neighboring gene dual specificity phosphatase 12 Neighboring gene Fc receptor like B

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006620.3 Chromosome 38 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    cyclic AMP-dependent transcription factor ATF-6 alpha

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006620.3 Reference CanFam3.1 Primary Assembly

      Range
      20705167..20903852 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_545777.6XP_545777.3  cyclic AMP-dependent transcription factor ATF-6 alpha isoform X2

      UniProtKB/TrEMBL
      F1PAF2
      Related
      ENSCAFP00000019250.3, ENSCAFT00000020736.3
      Conserved Domains (1) summary
      cd14700
      Location:298349
      bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
    2. XM_005640861.3XP_005640918.1  cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1

      Conserved Domains (1) summary
      cd14700
      Location:316367
      bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
    3. XM_014111203.2XP_013966678.2  cyclic AMP-dependent transcription factor ATF-6 alpha isoform X3

      Conserved Domains (2) summary
      cd14700
      Location:285336
      bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain
      cl27975
      Location:130242
      EBV-NA3; Epstein-Barr virus nuclear antigen 3 (EBNA-3)
    4. XM_014111204.2XP_013966679.1  cyclic AMP-dependent transcription factor ATF-6 alpha isoform X4

      Conserved Domains (1) summary
      cd14700
      Location:242293
      bZIP_ATF6; Basic leucine zipper (bZIP) domain of Activating Transcription Factor-6 (ATF-6) and similar proteins: a DNA-binding and dimerization domain

    RNA

    1. XR_002623866.1 RNA Sequence

    Support Center