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    LGI3 leucine rich repeat LGI family member 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 486128, updated on 26-Sep-2018

    Summary

    Official Symbol
    LGI3provided by VGNC
    Official Full Name
    leucine rich repeat LGI family member 3provided by VGNC
    Primary source
    VGNC:VGNC:42652
    See related
    Ensembl:ENSCAFG00000009637
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See LGI3 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 25 NC_006607.3 (35097464..35105930)

    Chromosome 25 - NC_006607.3Genomic Context describing neighboring genes Neighboring gene bone morphogenetic protein 1 Neighboring gene surfactant protein C Neighboring gene receptor accessory protein 4 Neighboring gene HR, lysine demethylase and nuclear receptor corepressor

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006607.3 Chromosome 25 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    leucine-rich repeat LGI family member 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006607.3 Reference CanFam3.1 Primary Assembly

      Range
      35097464..35105930
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_543254.6XP_543254.3  leucine-rich repeat LGI family member 3

      UniProtKB/TrEMBL
      F1PG90
      Related
      ENSCAFP00000014169.3, ENSCAFT00000015312.3
      Conserved Domains (6) summary
      smart00370
      Location:141164
      LRR; Leucine-rich repeats, outliers
      smart00082
      Location:176224
      LRRCT; Leucine rich repeat C-terminal domain
      sd00031
      Location:7495
      LRR_1; leucine-rich repeat [structural motif]
      pfam03736
      Location:228269
      EPTP; EPTP domain
      pfam12799
      Location:119158
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:118178
      LRR_8; Leucine rich repeat
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