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    NFIC nuclear factor I C [ Canis lupus familiaris (dog) ]

    Gene ID: 485061, updated on 26-Sep-2018

    Summary

    Official Symbol
    NFICprovided by VGNC
    Official Full Name
    nuclear factor I Cprovided by VGNC
    Primary source
    VGNC:VGNC:43777
    See related
    Ensembl:ENSCAFG00000019246
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See NFIC in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 20 NC_006602.3 (55920614..55980307, complement)

    Chromosome 20 - NC_006602.3Genomic Context describing neighboring genes Neighboring gene chromosome 20 open reading frame, human C19orf77 Neighboring gene small integral membrane protein 24-like Neighboring gene uncharacterized LOC102153539 Neighboring gene CUGBP Elav-like family member 5 Neighboring gene nicalin

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006602.3 Chromosome 20 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006602.3 Reference CanFam3.1 Primary Assembly

      Range
      55920614..55980307 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542179.7XP_542179.4  nuclear factor 1 C-type isoform X2

      See identical proteins and their annotated locations for XP_542179.4

      Related
      ENSCAFP00000028388.3, ENSCAFT00000030551.3
      Conserved Domains (3) summary
      pfam00859
      Location:217505
      CTF_NFI; CTF/NF-I family transcription modulation region
      pfam10524
      Location:1047
      NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
      cl00055
      Location:68169
      MH1; N-terminal Mad Homology 1 (MH1) domain
    2. XM_003639748.4XP_003639796.1  nuclear factor 1 C-type isoform X5

      See identical proteins and their annotated locations for XP_003639796.1

      Conserved Domains (3) summary
      pfam00859
      Location:217423
      CTF_NFI; CTF/NF-I family transcription modulation region
      pfam10524
      Location:1047
      NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
      cl00055
      Location:68169
      MH1; N-terminal Mad Homology 1 (MH1) domain
    3. XM_003639747.4XP_003639795.1  nuclear factor 1 C-type isoform X4

      See identical proteins and their annotated locations for XP_003639795.1

      Related
      ENSCAFP00000028389.3, ENSCAFT00000030552.4
      Conserved Domains (3) summary
      pfam00859
      Location:217424
      CTF_NFI; CTF/NF-I family transcription modulation region
      pfam10524
      Location:1047
      NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
      cl00055
      Location:68169
      MH1; N-terminal Mad Homology 1 (MH1) domain
    4. XM_014122005.1XP_013977480.1  nuclear factor 1 C-type isoform X3

      Conserved Domains (3) summary
      pfam00859
      Location:239446
      CTF_NFI; CTF/NF-I family transcription modulation region
      pfam10524
      Location:3369
      NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
      cl00055
      Location:90191
      MH1; N-terminal Mad Homology 1 (MH1) domain
    5. XM_014122004.1XP_013977479.1  nuclear factor 1 C-type isoform X1

      Conserved Domains (3) summary
      pfam00859
      Location:239527
      CTF_NFI; CTF/NF-I family transcription modulation region
      pfam10524
      Location:3369
      NfI_DNAbd_pre-N; Nuclear factor I protein pre-N-terminus
      cl00055
      Location:90191
      MH1; N-terminal Mad Homology 1 (MH1) domain
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