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    CNTNAP4 contactin associated protein like 4 [ Canis lupus familiaris (dog) ]

    Gene ID: 479642, updated on 26-Sep-2018

    Summary

    Official Symbol
    CNTNAP4provided by VGNC
    Official Full Name
    contactin associated protein like 4provided by VGNC
    Primary source
    VGNC:VGNC:39439
    See related
    Ensembl:ENSCAFG00000020059
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See CNTNAP4 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 5 NC_006587.3 (74507728..74748798, complement)

    Chromosome 5 - NC_006587.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096127 Neighboring gene uncharacterized LOC102157237 Neighboring gene uncharacterized LOC111096128 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006587.3 Chromosome 5 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    contactin-associated protein-like 4

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006587.3 Reference CanFam3.1 Primary Assembly

      Range
      74507728..74748798 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536775.5XP_536775.2  contactin-associated protein-like 4

      UniProtKB/TrEMBL
      F1PAM8
      Related
      ENSCAFP00000029720.2, ENSCAFT00000031919.2
      Conserved Domains (7) summary
      smart00231
      Location:55177
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain
      cd00054
      Location:963997
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00057
      Location:54176
      FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.
      cd00110
      Location:795939
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam00008
      Location:554585
      EGF; EGF-like domain
      pfam02210
      Location:212341
      Laminin_G_2; Laminin G domain
      cl02436
      Location:605783
      COLFI; Fibrillar collagen C-terminal domain
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