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    TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 478760, updated on 26-Sep-2018

    Summary

    Official Symbol
    TANC1provided by VGNC
    Official Full Name
    tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1provided by VGNC
    Primary source
    VGNC:VGNC:47098
    See related
    Ensembl:ENSCAFG00000009370
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See TANC1 in Genome Data Viewer
    Location:
    chromosome: 36
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 36 NC_006618.3 (4850214..5019453)

    Chromosome 36 - NC_006618.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111094227 Neighboring gene uncharacterized LOC111094228 Neighboring gene tetraspanin-17 pseudogene Neighboring gene uncharacterized LOC111094199 Neighboring gene chromobox protein homolog 3 pseudogene Neighboring gene protein TANC1-like Neighboring gene exostosin-like 2 pseudogene Neighboring gene WD repeat, sterile alpha motif and U-box domain containing 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006618.3 Chromosome 36 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006618.3 Reference CanFam3.1 Primary Assembly

      Range
      4850214..5019453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022414707.1XP_022270415.1  protein TANC1 isoform X1

      Related
      ENSCAFP00000013802.3, ENSCAFT00000014914.3
      Conserved Domains (4) summary
      COG0457
      Location:12881385
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:11111234
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12951320
      TPR; TPR repeat [structural motif]
      sd00045
      Location:11481178
      ANK; ANK repeat [structural motif]
    2. XM_022414709.1XP_022270417.1  protein TANC1 isoform X3

      Conserved Domains (4) summary
      COG0457
      Location:12811378
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:11041227
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12881313
      TPR; TPR repeat [structural motif]
      sd00045
      Location:11411171
      ANK; ANK repeat [structural motif]
    3. XM_022414711.1XP_022270419.1  protein TANC1 isoform X6

      Conserved Domains (4) summary
      COG0457
      Location:12001297
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:10231146
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12071232
      TPR; TPR repeat [structural motif]
      sd00045
      Location:10601090
      ANK; ANK repeat [structural motif]
    4. XM_022414708.1XP_022270416.1  protein TANC1 isoform X2

      Conserved Domains (5) summary
      COG0457
      Location:12871384
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:11101233
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12941319
      TPR; TPR repeat [structural motif]
      sd00045
      Location:11471177
      ANK; ANK repeat [structural motif]
      cl28033
      Location:26364
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    5. XM_022414710.1XP_022270418.1  protein TANC1 isoform X4

      Conserved Domains (5) summary
      COG0457
      Location:12801377
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:11031226
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12871312
      TPR; TPR repeat [structural motif]
      sd00045
      Location:11401170
      ANK; ANK repeat [structural motif]
      cl28033
      Location:26357
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
    6. XM_022414712.1XP_022270420.1  protein TANC1 isoform X7

      Conserved Domains (4) summary
      COG0457
      Location:11821279
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      cd00204
      Location:10051128
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:11891214
      TPR; TPR repeat [structural motif]
      sd00045
      Location:10421072
      ANK; ANK repeat [structural motif]
    7. XM_005640204.3XP_005640261.1  protein TANC1 isoform X5

      Conserved Domains (7) summary
      cd00204
      Location:10491172
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      sd00006
      Location:12331258
      TPR; TPR repeat [structural motif]
      pfam12796
      Location:10571149
      Ank_2; Ankyrin repeats (3 copies)
      pfam13191
      Location:324366
      AAA_16; AAA ATPase domain
      pfam13414
      Location:12311308
      TPR_11; TPR repeat
      pfam13637
      Location:879928
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:10861116
      ANK; ANK repeat [structural motif]
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