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    GALNT13 polypeptide N-acetylgalactosaminyltransferase 13 [ Canis lupus familiaris (dog) ]

    Gene ID: 478753, updated on 7-Oct-2019

    Summary

    Official Symbol
    GALNT13provided by VGNC
    Official Full Name
    polypeptide N-acetylgalactosaminyltransferase 13provided by VGNC
    Primary source
    VGNC:VGNC:41088
    See related
    Ensembl:ENSCAFG00000009140
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See GALNT13 in Genome Data Viewer
    Location:
    chromosome: 36
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 36 NC_006618.3 (616209..1157229)

    Chromosome 36 - NC_006618.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111094276 Neighboring gene mitochondrial inner membrane organizing system 1 pseudogene Neighboring gene 60 kDa heat shock protein, mitochondrial-like Neighboring gene uncharacterized LOC111094288 Neighboring gene uncharacterized LOC111094287 Neighboring gene uncharacterized LOC102151277 Neighboring gene uncharacterized LOC106558288 Neighboring gene uncharacterized LOC111094297 Neighboring gene potassium inwardly rectifying channel subfamily J member 3

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006618.3 Chromosome 36 Reference CanFam3.1 Primary Assembly

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 13
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)
    XP_005640243.1
    XP_022270568.1
    XP_022270569.1
    XP_022270570.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006618.3 Reference CanFam3.1 Primary Assembly

      Range
      616209..1157229
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022414861.1XP_022270569.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

      Related
      ENSCAFP00000013487.3, ENSCAFT00000014579.4
      Conserved Domains (2) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:431548
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    2. XM_022414860.1XP_022270568.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X1

      Related
      ENSCAFP00000044802.1, ENSCAFT00000091497.1
      Conserved Domains (2) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:431548
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    3. XM_022414862.1XP_022270570.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X3

      Related
      ENSCAFP00000055208.1, ENSCAFT00000081815.1
      Conserved Domains (2) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      cl26069
      Location:431474
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    4. XM_005640186.2XP_005640243.1  polypeptide N-acetylgalactosaminyltransferase 13 isoform X2

      See identical proteins and their annotated locations for XP_005640243.1

      UniProtKB/TrEMBL
      J9NYT5
      Related
      ENSCAFP00000038454.1, ENSCAFT00000045004.3
      Conserved Domains (2) summary
      cd02510
      Location:118418
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      pfam00652
      Location:431547
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
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