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    TNPO1 transportin 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 478093, updated on 26-Sep-2018

    Summary

    Official Symbol
    TNPO1provided by VGNC
    Official Full Name
    transportin 1provided by VGNC
    Primary source
    VGNC:VGNC:47694
    See related
    Ensembl:ENSCAFG00000008081
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See TNPO1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 2 NC_006584.3 (55795737..55859366)

    Chromosome 2 - NC_006584.3Genomic Context describing neighboring genes Neighboring gene histone H2B subacrosomal variant-like Neighboring gene uncharacterized LOC106557974 Neighboring gene histone-lysine N-methyltransferase 2D-like Neighboring gene protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha-like Neighboring gene FCH domain only 2

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006584.3 Chromosome 2 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006584.3 Reference CanFam3.1 Primary Assembly

      Range
      55795737..55859366
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_535270.5XP_535270.3  transportin-1

      Related
      ENSCAFP00000011990.4, ENSCAFT00000012955.4
      Conserved Domains (5) summary
      cd00020
      Location:178293
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam03810
      Location:86152
      IBN_N; Importin-beta N-terminal domain
      pfam13513
      Location:462516
      HEAT_EZ; HEAT-like repeat
      pfam13646
      Location:451554
      HEAT_2; HEAT repeats
      sd00044
      Location:146167
      HEAT; HEAT repeat [structural motif]
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