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    OGDH oxoglutarate dehydrogenase [ Canis lupus familiaris (dog) ]

    Gene ID: 475499, updated on 23-Sep-2017

    Summary

    Gene symbol
    OGDH
    Gene description
    oxoglutarate dehydrogenase
    See related
    Ensembl:ENSCAFG00000003104
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See OGDH in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) Unplaced Scaffold NW_003726174.1 (285811..325653, complement)

    NW_003726174.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111094992 Neighboring gene uncharacterized LOC106558496 Neighboring gene zinc finger MIZ-type containing 2 Neighboring gene transmembrane p24 trafficking protein 4 Neighboring gene DEAD-box helicase 56

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NW_003726174 Unplaced Scaffold Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    2-oxoglutarate dehydrogenase, mitochondrial
    XP_005642238.1
    XP_005642239.1
    XP_005642240.1
    XP_013967508.1
    XP_022272217.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NW_003726174.1 Reference CanFam3.1 Primary Assembly

      Range
      285811..325653 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022416509.1XP_022272217.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X5

      Conserved Domains (1) summary
      cl25580
      Location:6745
      OxoGdeHyase_C; 2-oxoglutarate dehydrogenase C-terminal
    2. XM_005642181.3XP_005642238.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X2

      Conserved Domains (2) summary
      cd02016
      Location:169432
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:554769
      Transket_pyr; Transketolase, pyrimidine binding domain
    3. XM_005642183.3XP_005642240.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X4

      Conserved Domains (2) summary
      cd02016
      Location:154417
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:539754
      Transket_pyr; Transketolase, pyrimidine binding domain
    4. XM_014112033.2XP_013967508.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X1

      Conserved Domains (2) summary
      cd02016
      Location:173436
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:558773
      Transket_pyr; Transketolase, pyrimidine binding domain
    5. XM_005642182.3XP_005642239.1  2-oxoglutarate dehydrogenase, mitochondrial isoform X3

      UniProtKB/TrEMBL
      H9GW68
      Related
      ENSCAFP00000004633.3, ENSCAFT00000004996.3
      Conserved Domains (2) summary
      cd02016
      Location:158421
      TPP_E1_OGDC_like; Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC). OGDC catalyzes the oxidative decarboxylation of ...
      pfam02779
      Location:543758
      Transket_pyr; Transketolase, pyrimidine binding domain
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