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    GRIA1 glutamate ionotropic receptor AMPA type subunit 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 471714, updated on 21-May-2019

    Summary

    Official Symbol
    GRIA1provided by VGNC
    Official Full Name
    glutamate ionotropic receptor AMPA type subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:8622
    Locus tag
    CK820_G0010137
    See related
    Ensembl:ENSPTRG00000017441
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See GRIA1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (131622139..131949681)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 5 NC_006472.4 (153724563..154053194)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (154321426..154651693)

    Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100612064 Neighboring gene uncharacterized LOC107974905 Neighboring gene neuromedin U receptor 2 Neighboring gene uncharacterized LOC107974741 Neighboring gene uncharacterized LOC112209202

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    glutamate receptor 1
    Names
    glutamate receptor, ionotropic, AMPA 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

      Range
      131622139..131949681
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016954093.1XP_016809582.1  glutamate receptor 1 isoform X3

      Conserved Domains (2) summary
      cd06390
      Location:9369
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      cd13729
      Location:386767
      PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    2. XM_003310925.3XP_003310973.1  glutamate receptor 1 isoform X1

      See identical proteins and their annotated locations for XP_003310973.1

      UniProtKB/TrEMBL
      H2QRU7
      Related
      ENSPTRP00000071800.1, ENSPTRT00000079136.1
      Conserved Domains (2) summary
      cd06390
      Location:26389
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      cd13729
      Location:406787
      PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    3. XM_009450009.2XP_009448284.1  glutamate receptor 1 isoform X2

      See identical proteins and their annotated locations for XP_009448284.1

      UniProtKB/TrEMBL
      K7CQM1
      Related
      ENSPTRP00000029795.4, ENSPTRT00000032251.4
      Conserved Domains (2) summary
      cd06390
      Location:26389
      PBP1_iGluR_AMPA_GluR1; N-terminal leucine/isoleucine/valine-binding protein (LIVBP)-like domain of the GluR1 subunit of the AMPA receptor
      cd13729
      Location:406787
      PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
    4. XM_003310927.4XP_003310975.1  glutamate receptor 1 isoform X4

      See identical proteins and their annotated locations for XP_003310975.1

      Conserved Domains (2) summary
      cd13729
      Location:337718
      PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
      cl10011
      Location:1320
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
    5. XM_009450010.1XP_009448285.1  glutamate receptor 1 isoform X4

      See identical proteins and their annotated locations for XP_009448285.1

      Related
      ENSPTRP00000085027.1, ENSPTRT00000091693.1
      Conserved Domains (2) summary
      cd13729
      Location:337718
      PBP2_iGluR_AMPA_GluR1; The ligand-binding domain of the AMPA (alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionic acid) subtype GluR1 of ionotropic glutamate receptors, a member of the type 2 periplasmic binding fold protein superfamily
      cl10011
      Location:1320
      Periplasmic_Binding_Protein_Type_1; Type 1 periplasmic binding fold superfamily
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