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    DPT dermatopontin [ Pan troglodytes (chimpanzee) ]

    Gene ID: 469573, updated on 6-Oct-2018

    Summary

    Official Symbol
    DPTprovided by VGNC
    Official Full Name
    dermatopontinprovided by VGNC
    Primary source
    VGNC:VGNC:522
    Locus tag
    CK820_G0027770
    See related
    Ensembl:ENSPTRG00000001651
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See DPT in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 1 NC_036879.1 (143732846..143766602, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 1 NC_006468.3 (147081199..147116074, complement)

    Chromosome 1 - NC_036879.1Genomic Context describing neighboring genes Neighboring gene lymphotactin Neighboring gene lymphotactin-like Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene uncharacterized LOC107969194 Neighboring gene uncharacterized LOC101059774 Neighboring gene small ubiquitin-related modifier 1 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036879.1 Reference Clint_PTRv2 Primary Assembly

      Range
      143732846..143766602 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001135049.5XP_001135049.1  dermatopontin

      See identical proteins and their annotated locations for XP_001135049.1

      UniProtKB/TrEMBL
      H2Q0J9
      Related
      ENSPTRP00000002748.2
      Conserved Domains (1) summary
      pfam14704
      Location:43192
      DERM; Dermatopontin
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