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    VEZF1 vascular endothelial zinc finger 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 468416, updated on 6-Oct-2018

    Summary

    Official Symbol
    VEZF1provided by VGNC
    Official Full Name
    vascular endothelial zinc finger 1provided by VGNC
    Primary source
    VGNC:VGNC:14219
    Locus tag
    CK820_G0020913
    See related
    Ensembl:ENSPTRG00000009442
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ZNF161
    Orthologs

    Genomic context

    See VEZF1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 17 NC_036896.1 (51209548..51226222, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 17 NC_006484.3 (56669562..56681362, complement)

    Chromosome 17 - NC_036896.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S23 Neighboring gene CUE domain containing 1 Neighboring gene uncharacterized LOC107969280 Neighboring gene putative glycine-rich cell wall structural protein 1 Neighboring gene serine and arginine rich splicing factor 1 Neighboring gene uncharacterized LOC104002942

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    vascular endothelial zinc finger 1
    Names
    zinc finger protein 161

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036896.1 Reference Clint_PTRv2 Primary Assembly

      Range
      51209548..51226222 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024350532.1XP_024206300.1  vascular endothelial zinc finger 1 isoform X4

      Conserved Domains (4) summary
      COG5189
      Location:189246
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:167187
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:165187
      zf-C2H2; Zinc finger, C2H2 type
      cl26091
      Location:368506
      MotB_plug; Membrane MotB of proton-channel complex MotA/MotB
    2. XM_016932624.2XP_016788113.1  vascular endothelial zinc finger 1 isoform X2

      Related
      ENSPTRP00000016035.4
      Conserved Domains (3) summary
      COG5189
      Location:198255
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:176196
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl26091
      Location:377515
      MotB_plug; Membrane MotB of proton-channel complex MotA/MotB
    3. XM_016932623.2XP_016788112.1  vascular endothelial zinc finger 1 isoform X1

    4. XM_016932625.2XP_016788114.1  vascular endothelial zinc finger 1 isoform X3

      Related
      ENSPTRP00000072286.1
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