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    AIPL1 aryl hydrocarbon receptor interacting protein like 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 468171, updated on 6-Oct-2018

    Summary

    Official Symbol
    AIPL1provided by VGNC
    Official Full Name
    aryl hydrocarbon receptor interacting protein like 1provided by VGNC
    Primary source
    VGNC:VGNC:9121
    Locus tag
    CK820_G0036882
    See related
    Ensembl:ENSPTRG00000008640
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See AIPL1 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 17 NC_036896.1 (6109150..6120637, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 17 NC_006484.3 (6451630..6463118, complement)

    Chromosome 17 - NC_036896.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC107969126 Neighboring gene PICALM interacting mitotic regulator Neighboring gene PITPNM family member 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    aryl-hydrocarbon-interacting protein-like 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036896.1 Reference Clint_PTRv2 Primary Assembly

      Range
      6109150..6120637 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003952959.4XP_003953008.3  aryl-hydrocarbon-interacting protein-like 1 isoform X5

    2. XM_003952957.4XP_003953006.3  aryl-hydrocarbon-interacting protein-like 1 isoform X6

    3. XM_003952956.4XP_003953005.3  aryl-hydrocarbon-interacting protein-like 1 isoform X4

    4. XM_001167495.6XP_001167495.4  aryl-hydrocarbon-interacting protein-like 1 isoform X1

      Conserved Domains (3) summary
      COG0457
      Location:179321
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:180224
      TPR; TPR repeat [structural motif]
      cl19519
      Location:3089
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
    5. XM_003952960.4XP_003953009.3  aryl-hydrocarbon-interacting protein-like 1 isoform X3

    6. XM_003952958.4XP_003953007.3  aryl-hydrocarbon-interacting protein-like 1 isoform X2

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