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    CALHM1 calcium homeostasis modulator 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 466194, updated on 6-Oct-2018

    Summary

    Official Symbol
    CALHM1provided by VGNC
    Official Full Name
    calcium homeostasis modulator 1provided by VGNC
    Primary source
    VGNC:VGNC:11681
    Locus tag
    CK820_G0004034
    See related
    Ensembl:ENSPTRG00000002914
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See CALHM1 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 10 NC_036889.1 (99295239..99301023, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 10 NC_006477.3 (102686787..102695718, complement)

    Chromosome 10 - NC_036889.1Genomic Context describing neighboring genes Neighboring gene programmed cell death 11 Neighboring gene calcium homeostasis modulator family member 2 Neighboring gene calcium homeostasis modulator 3 Neighboring gene neuralized E3 ubiquitin protein ligase 1 Neighboring gene SH3 and PX domains 2A

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Taste transduction, organism-specific biosystem (from KEGG)
      Taste transduction, organism-specific biosystemFive basic tastes are recognized by humans and most other animals - bitter, sweet, sour, salty and umami. In vertebrates, taste stimuli are detected by taste receptor cells (TRCs). At least three dis...
    • Taste transduction, conserved biosystem (from KEGG)
      Taste transduction, conserved biosystemFive basic tastes are recognized by humans and most other animals - bitter, sweet, sour, salty and umami. In vertebrates, taste stimuli are detected by taste receptor cells (TRCs). At least three dis...

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    calcium homeostasis modulator protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036889.1 Reference Clint_PTRv2 Primary Assembly

      Range
      99295239..99301023 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016919271.1XP_016774760.1  calcium homeostasis modulator protein 1

      UniProtKB/TrEMBL
      H2Q2J0
      Related
      ENSPTRP00000005130.4, ENSPTRT00000005545.5
      Conserved Domains (1) summary
      pfam14798
      Location:2255
      Ca_hom_mod; Calcium homeostasis modulator
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