Format

Send to:

Choose Destination
    • Showing Current items.

    GLCCI1 glucocorticoid induced 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 463263, updated on 6-Oct-2018

    Summary

    Official Symbol
    GLCCI1provided by VGNC
    Official Full Name
    glucocorticoid induced 1provided by VGNC
    Primary source
    VGNC:VGNC:4375
    Locus tag
    CK820_G0021242
    See related
    Ensembl:ENSPTRG00000018929
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See GLCCI1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 7 NC_036886.1 (8121526..8241941)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 7 NC_006474.3 (6580025..6700297)

    Chromosome 7 - NC_036886.1Genomic Context describing neighboring genes Neighboring gene G2/mitotic-specific cyclin-B2 pseudogene Neighboring gene uncharacterized LOC104007108 Neighboring gene peptidyl-prolyl cis-trans isomerase-like 4 Neighboring gene islet cell autoantigen 1 Neighboring gene uncharacterized LOC100613260 Neighboring gene neurexophilin 1 Neighboring gene uncharacterized LOC107971726

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    glucocorticoid-induced transcript 1 protein
    Names
    glucocorticoid induced transcript 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036886.1 Reference Clint_PTRv2 Primary Assembly

      Range
      8121526..8241941
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_518970.7XP_518970.5  glucocorticoid-induced transcript 1 protein isoform X1

      Conserved Domains (1) summary
      pfam15388
      Location:166476
      FAM117; Protein Family FAM117
    2. XM_009452644.3XP_009450919.3  glucocorticoid-induced transcript 1 protein isoform X4

      Conserved Domains (1) summary
      pfam15388
      Location:166422
      FAM117; Protein Family FAM117
    3. XM_009452643.3XP_009450918.3  glucocorticoid-induced transcript 1 protein isoform X2

      Conserved Domains (1) summary
      pfam15388
      Location:166475
      FAM117; Protein Family FAM117
    4. XM_009452645.3XP_009450920.1  glucocorticoid-induced transcript 1 protein isoform X5

      Conserved Domains (1) summary
      pfam15388
      Location:166384
      FAM117; Protein Family FAM117
    5. XM_016957080.2XP_016812569.2  glucocorticoid-induced transcript 1 protein isoform X3

      Conserved Domains (1) summary
      pfam15388
      Location:166446
      FAM117; Protein Family FAM117
    Support Center