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    PFDN1 prefoldin subunit 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 462112, updated on 6-Oct-2018

    Summary

    Official Symbol
    PFDN1provided by VGNC
    Official Full Name
    prefoldin subunit 1provided by VGNC
    Primary source
    VGNC:VGNC:13562
    Locus tag
    CK820_G0047119
    See related
    Ensembl:ENSPTRG00000017310
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See PFDN1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (118420040..118478100, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (140968583..141024613, complement)

    Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene IgA inducing protein Neighboring gene cysteine rich transmembrane module containing 1 Neighboring gene heparin binding EGF like growth factor Neighboring gene solute carrier family 4 member 9

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

      Range
      118420040..118478100 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_517971.5XP_517971.1  prefoldin subunit 1

      See identical proteins and their annotated locations for XP_517971.1

      UniProtKB/TrEMBL
      H2QRM0
      Related
      ENSPTRP00000029594.2, ENSPTRT00000032030.3
      Conserved Domains (1) summary
      pfam01920
      Location:14117
      Prefoldin_2; Prefoldin subunit
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