Format

Send to:

Choose Destination
    • Showing Current items.

    MTMR12 myotubularin related protein 12 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 461947, updated on 6-Oct-2018

    Summary

    Official Symbol
    MTMR12provided by VGNC
    Official Full Name
    myotubularin related protein 12provided by VGNC
    Primary source
    VGNC:VGNC:13548
    Locus tag
    CK820_G0039408
    See related
    Ensembl:ENSPTRG00000016770
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See MTMR12 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 5 NC_036884.1 (60412889..60498704)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 5 NC_006472.3 (82885164..82973542)

    Chromosome 5 - NC_036884.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 183A-like Neighboring gene zinc finger RNA binding protein Neighboring gene microRNA 579 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L27 pseudogene Neighboring gene golgi phosphoprotein 3

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    myotubularin-related protein 12

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036884.1 Reference Clint_PTRv2 Primary Assembly

      Range
      60412889..60498704
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024356647.1XP_024212415.1  myotubularin-related protein 12 isoform X1

      Conserved Domains (3) summary
      pfam12578
      Location:660783
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:421573
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    2. XM_024356648.1XP_024212416.1  myotubularin-related protein 12 isoform X2

      Conserved Domains (3) summary
      pfam12578
      Location:640763
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:421573
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    3. XM_024356650.1XP_024212418.1  myotubularin-related protein 12 isoform X7

      Conserved Domains (3) summary
      pfam12578
      Location:530653
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:421531
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    4. XM_024356649.1XP_024212417.1  myotubularin-related protein 12 isoform X3

      Conserved Domains (3) summary
      pfam12578
      Location:631754
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:288544
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    5. XM_009449338.2XP_009447613.2  myotubularin-related protein 12 isoform X4

    6. XM_009449341.2XP_009447616.2  myotubularin-related protein 12 isoform X5

      Conserved Domains (3) summary
      pfam12578
      Location:581706
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:181496
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    7. XM_009449344.2XP_009447619.2  myotubularin-related protein 12 isoform X10

      Related
      ENSPTRP00000078466.1, ENSPTRT00000083877.1
      Conserved Domains (3) summary
      pfam12578
      Location:453576
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:228454
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    8. XM_024356651.1XP_024212419.1  myotubularin-related protein 12 isoform X8

      Conserved Domains (2) summary
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:421573
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    9. XM_024356652.1XP_024212420.1  myotubularin-related protein 12 isoform X9

      Conserved Domains (2) summary
      pfam12578
      Location:457580
      3-PAP; Myotubularin-associated protein
      cl21483
      Location:218370
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    10. XM_517831.6XP_517831.4  myotubularin-related protein 12 isoform X6

      UniProtKB/TrEMBL
      K7CH21
      Related
      ENSPTRP00000074667.1, ENSPTRT00000097682.1
      Conserved Domains (3) summary
      pfam12578
      Location:563686
      3-PAP; Myotubularin-associated protein
      cl17171
      Location:26202
      PH-like; Pleckstrin homology-like domain
      cl21483
      Location:228496
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    11. XM_024356654.1XP_024212422.1  myotubularin-related protein 12 isoform X9

      Conserved Domains (2) summary
      pfam12578
      Location:457580
      3-PAP; Myotubularin-associated protein
      cl21483
      Location:218370
      PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
    Support Center