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    IMPACT impact RWD domain protein [ Pan troglodytes (chimpanzee) ]

    Gene ID: 455343, updated on 3-Apr-2018

    Summary

    Official Symbol
    IMPACTprovided by VGNC
    Official Full Name
    impact RWD domain proteinprovided by VGNC
    Primary source
    VGNC:VGNC:8870
    See related
    Ensembl:ENSPTRG00000009927
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See IMPACT in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 18 NC_036897.1 (18315176..18367939)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 18 NC_006485.3 (20129530..20153958)

    Chromosome 18 - NC_036897.1Genomic Context describing neighboring genes Neighboring gene oxysterol binding protein like 1A Neighboring gene U6 spliceosomal RNA Neighboring gene microRNA 320c-2 Neighboring gene uncharacterized LOC112206256 Neighboring gene histamine receptor H4 Neighboring gene uncharacterized LOC104003108 Neighboring gene uncharacterized LOC104003107

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    protein IMPACT
    Names
    Impact homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036897.1 Reference Clint_PTRv2 Primary Assembly

      Range
      18315176..18367939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016933471.2XP_016788960.2  protein IMPACT isoform X1

      Conserved Domains (2) summary
      smart00591
      Location:15115
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:182289
      UPF0029; Uncharacterized protein family UPF0029
    2. XM_512067.7XP_512067.5  protein IMPACT isoform X1

      Conserved Domains (2) summary
      smart00591
      Location:15115
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:182289
      UPF0029; Uncharacterized protein family UPF0029
    3. XM_016933472.2XP_016788961.2  protein IMPACT isoform X1

      Conserved Domains (2) summary
      smart00591
      Location:15115
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:182289
      UPF0029; Uncharacterized protein family UPF0029
    4. XM_024350992.1XP_024206760.1  protein IMPACT isoform X4

      Conserved Domains (2) summary
      smart00591
      Location:15115
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:182253
      UPF0029; Uncharacterized protein family UPF0029
    5. XM_009433816.3XP_009432091.3  protein IMPACT isoform X3

      Conserved Domains (2) summary
      smart00591
      Location:1272
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:139246
      UPF0029; Uncharacterized protein family UPF0029
    6. XM_009433815.3XP_009432090.3  protein IMPACT isoform X2

      Conserved Domains (2) summary
      smart00591
      Location:197
      RWD; domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain
      pfam01205
      Location:164271
      UPF0029; Uncharacterized protein family UPF0029

    RNA

    1. XR_001711279.2 RNA Sequence

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