Format

Send to:

Choose Destination
    • Showing Current items.

    FBXO21 F-box protein 21 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 452287, updated on 5-Oct-2018

    Summary

    Official Symbol
    FBXO21provided by VGNC
    Official Full Name
    F-box protein 21provided by VGNC
    Primary source
    VGNC:VGNC:5378
    Locus tag
    CK820_G0021753
    See related
    Ensembl:ENSPTRG00000005505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See FBXO21 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 12 NC_036891.1 (114785756..114832424, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 12 NC_006479.3 (117677797..117724565, complement)

    Chromosome 12 - NC_036891.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107967653 Neighboring gene uncharacterized LOC107967654 Neighboring gene elongin-C pseudogene Neighboring gene nitric oxide synthase 1 Neighboring gene kinase suppressor of ras 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036891.1 Reference Clint_PTRv2 Primary Assembly

      Range
      114785756..114832424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001155956.5XP_001155956.1  F-box only protein 21 isoform X1

      See identical proteins and their annotated locations for XP_001155956.1

      UniProtKB/TrEMBL
      H2Q6Z1
      Related
      ENSPTRP00000009341.3, ENSPTRT00000010103.4
      Conserved Domains (3) summary
      TIGR02097
      Location:500597
      yccV; hemimethylated DNA binding domain
      pfam12937
      Location:3077
      F-box-like; F-box-like
      pfam13369
      Location:216388
      Transglut_core2; Transglutaminase-like superfamily
    2. XM_001156074.5XP_001156074.1  F-box only protein 21 isoform X2

      See identical proteins and their annotated locations for XP_001156074.1

      UniProtKB/TrEMBL
      K7D801
      Conserved Domains (3) summary
      TIGR02097
      Location:493590
      yccV; hemimethylated DNA binding domain
      pfam12937
      Location:3077
      F-box-like; F-box-like
      pfam13369
      Location:216388
      Transglut_core2; Transglutaminase-like superfamily
    Support Center