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    med23 mediator complex subunit 23 [ Danio rerio (zebrafish) ]

    Gene ID: 445483, updated on 2-Oct-2018

    Summary

    Official Symbol
    med23provided by ZNC
    Official Full Name
    mediator complex subunit 23provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040724-82
    See related
    Ensembl:ENSDARG00000029157 Vega:OTTDARG00000028810
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    crsp3; zgc:91979; si:ch211-272f15.2
    Orthologs

    Genomic context

    See med23 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (2499622..2584128, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (2482455..2566964, complement)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101885084 Neighboring gene A-kinase anchor protein 7-like Neighboring gene A kinase (PRKA) anchor protein 7 Neighboring gene interleukin 20 receptor, alpha Neighboring gene BUB1 mitotic checkpoint serine/threonine kinase

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    cardiovascular system development IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    negative regulation of neurogenesis IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    pigmentation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    mediator of RNA polymerase II transcription subunit 23
    Names
    CRSP complex subunit 3
    cofactor required for Sp1 transcriptional activation subunit 3

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003990.1NP_001003990.1  mediator of RNA polymerase II transcription subunit 23

      See identical proteins and their annotated locations for NP_001003990.1

      Status: PROVISIONAL

      Source sequence(s)
      BC080264
      UniProtKB/Swiss-Prot
      Q5RIW8
      Conserved Domains (1) summary
      pfam11573
      Location:11283
      Med23; Mediator complex subunit 23

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      2499622..2584128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005160334.4XP_005160391.1  mediator of RNA polymerase II transcription subunit 23 isoform X3

      Related
      ENSDARP00000119918.1, OTTDARP00000031530, ENSDART00000135760.2
      Conserved Domains (1) summary
      pfam11573
      Location:51311
      Med23; Mediator complex subunit 23
    2. XM_005160335.4XP_005160392.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

      Conserved Domains (1) summary
      pfam11573
      Location:51317
      Med23; Mediator complex subunit 23
    3. XM_021468405.1XP_021324080.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

      Related
      ENSDARP00000116237.1, ENSDART00000141595.3
      Conserved Domains (1) summary
      pfam11573
      Location:251318
      Med23; Mediator complex subunit 23
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