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    dtd1 D-tyrosyl-tRNA deacylase 1 [ Danio rerio (zebrafish) ]

    Gene ID: 445046, updated on 1-Aug-2018

    Summary

    Official Symbol
    dtd1provided by ZNC
    Official Full Name
    D-tyrosyl-tRNA deacylase 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040801-175
    See related
    Ensembl:ENSDARG00000044628 Vega:OTTDARG00000021954
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    hars2; zgc:92657
    Orthologs

    Genomic context

    See dtd1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (6802556..6808505)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (6645387..6651336)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 85A, like Neighboring gene si:ch211-85n16.3 Neighboring gene Sec23 homolog B, COPII coat complex component Neighboring gene si:ch211-85n16.4 Neighboring gene zgc:171558

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    D-aminoacyl-tRNA deacylase activity IEA
    Inferred from Electronic Annotation
    more info
     
    D-tyrosyl-tRNA(Tyr) deacylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    RNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    aminoacyl-tRNA editing activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    aminoacyl-tRNA editing activity IEA
    Inferred from Electronic Annotation
    more info
     
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    tRNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    tRNA metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    D-aminoacyl-tRNA deacylase 1
    Names
    D-tyrosyl-tRNA(Tyr) deacylase 1
    gly-tRNA(Ala) deacylase 1
    gly-tRNA(Gly) deacylase 1
    histidyl-tRNA synthetase 2, mitochondrial (putative)
    NP_001003440.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001003440.1NP_001003440.1  D-aminoacyl-tRNA deacylase 1

      See identical proteins and their annotated locations for NP_001003440.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076141
      UniProtKB/Swiss-Prot
      F1QGC8
      Related
      ENSDARP00000065565.4, OTTDARP00000023012, ENSDART00000065566.5, OTTDART00000028129
      Conserved Domains (1) summary
      pfam02580
      Location:2146
      Tyr_Deacylase; D-Tyr-tRNA(Tyr) deacylase

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      6802556..6808505
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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