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    rps3.L ribosomal protein S3 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 444841, updated on 5-Aug-2018

    Summary

    Symbol
    rps3.L
    Full Name
    ribosomal protein S3 L homeolog
    Primary source
    Xenbase:XB-GENE-978304
    Locus tag
    XELAEV_18014054mg
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    rps3; rps3-a; rps3-b; XlrpS1c; ribosomal protein S1a
    Annotation information
    Annotation category: partial on reference assembly

    Genomic context

    See rps3.L in Genome Data Viewer
    Location:
    chromosome: 2L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (178192768..178203561, complement)

    Chromosome 2L - NC_030726.1Genomic Context describing neighboring genes Neighboring gene P2Y purinoceptor 3-like Neighboring gene serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) L homeolog Neighboring gene NACHT and WD repeat domain-containing protein 2-like Neighboring gene F-BAR and double SH3 domains protein 2-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_030726.1 Chromosome 2L Reference Xenopus_laevis_v2 Primary Assembly

    Bibliography

    Related articles in PubMed

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    40S ribosomal protein S3-A
    Names
    S1A
    NP_001094409.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100939.1NP_001094409.1  40S ribosomal protein S3-A

      See identical proteins and their annotated locations for NP_001094409.1

      Status: PROVISIONAL

      Source sequence(s)
      BC042230
      UniProtKB/Swiss-Prot
      P02350
      UniProtKB/TrEMBL
      A0A1L8HJY0
      Conserved Domains (3) summary
      cd02413
      Location:1595
      40S_S3_KH; K homology RNA-binding (KH) domain of the eukaryotic 40S small ribosomal subunit protein S3. S3 is part of the head region of the 40S ribosomal subunit and is believed to interact with mRNA as it threads its way from the latch into the channel. The KH ...
      PTZ00084
      Location:4219
      PTZ00084; 40S ribosomal protein S3; Provisional
      pfam00189
      Location:105186
      Ribosomal_S3_C; Ribosomal protein S3, C-terminal domain

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v2 Primary Assembly

    Genomic

    1. NC_030726.1 Reference Xenopus_laevis_v2 Primary Assembly

      Range
      178192768..178203561 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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