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    Vps33B Vacuolar protein sorting 33B [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43077, updated on 8-Oct-2018

    Summary

    Official Symbol
    Vps33Bprovided by FlyBase
    Official Full Name
    Vacuolar protein sorting 33Bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039335
    Locus tag
    Dmel_CG5127
    Gene type
    protein coding
    RNA name
    vacuolar protein sorting 33B
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG5127; Dmel\CG5127; dVps33B; Vps 33B; Vps33b; VPS33b

    Genomic context

    See Vps33B in Genome Data Viewer
    Location:
    96E1-96E1; 3-88 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25473490..25475756)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21299212..21301478)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Furin 1 Neighboring gene uncharacterized protein Neighboring gene Mucin 96D Neighboring gene uncharacterized protein Neighboring gene Mediator complex subunit 28 Neighboring gene XNP

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    syntaxin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    endosomal transport ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    immune response IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    mitotic spindle assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of SNARE complex assembly ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    vesicle docking involved in exocytosis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    CORVET complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    HOPS complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    HOPS complex ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 

    General protein information

    Preferred Names
    vacuolar protein sorting 33B
    Names
    CG5127-PA
    Vps33B-PA

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25473490..25475756
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143138.3NP_651395.1  vacuolar protein sorting 33B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651395.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VBR1
      Related
      FBpp0084210, FBtr0084835
      Conserved Domains (1) summary
      pfam00995
      Location:31406
      Sec1; Sec1 family
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