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    PLAG1 PLAG1 zinc finger [ Gallus gallus (chicken) ]

    Gene ID: 429484, updated on 2-Oct-2018

    Summary

    Symbol
    PLAG1provided by CGNC
    Full Name
    PLAG1 zinc fingerprovided by CGNC
    Primary source
    CGNC:53668
    See related
    Ensembl:ENSGALG00000015407
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See PLAG1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 2 NC_006089.5 (111228564..111284390, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 2 NC_006089.4 (111583957..111639837, complement)

    Chromosome 2 - NC_006089.5Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U54 Neighboring gene ribosomal protein S20 Neighboring gene MOS proto-oncogene, serine/threonine kinase Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 7 Neighboring gene short chain dehydrogenase/reductase family 16C, member 5 Neighboring gene epidermal retinol dehydrogenase 2-like

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    RNA polymerase II proximal promoter sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    gland morphogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    multicellular organism growth IEA
    Inferred from Electronic Annotation
    more info
     
    negative regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of glial cell proliferation IEA
    Inferred from Electronic Annotation
    more info
     
    positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
     
    prostate gland growth IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of transcription, DNA-templated IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    nuclear speck IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    zinc finger protein PLAG1
    Names
    pleiomorphic adenoma gene 1 protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031577.1NP_001026748.1  zinc finger protein PLAG1

      See identical proteins and their annotated locations for NP_001026748.1

      Status: PROVISIONAL

      Source sequence(s)
      AY935990
      UniProtKB/Swiss-Prot
      Q58NQ5
      Related
      ENSGALP00000024806.3, ENSGALT00000024852.5
      Conserved Domains (2) summary
      COG5189
      Location:58139
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:3656
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006089.5 Reference GRCg6a Primary Assembly

      Range
      111228564..111284390 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025147340.1XP_025003108.1  zinc finger protein PLAG1 isoform X1

      Conserved Domains (2) summary
      COG5189
      Location:58139
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      sd00017
      Location:3656
      ZF_C2H2; C2H2 Zn finger [structural motif]

    RNA

    1. XR_001465399.2 RNA Sequence

    2. XR_001465392.2 RNA Sequence

    3. XR_001465393.2 RNA Sequence

    4. XR_003073575.1 RNA Sequence

    5. XR_001465396.2 RNA Sequence

    6. XR_003073573.1 RNA Sequence

    7. XR_003073571.1 RNA Sequence

    8. XR_003073568.1 RNA Sequence

    9. XR_003073574.1 RNA Sequence

    10. XR_003073569.1 RNA Sequence

    11. XR_003073572.1 RNA Sequence

    12. XR_003073570.1 RNA Sequence

    13. XR_001465386.2 RNA Sequence

    14. XR_003073576.1 RNA Sequence

    15. XR_003073567.1 RNA Sequence

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